Os03g0791700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase domain containing protein.
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Os03g0791700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.97 | 0.577 | 7.18 | 0.249 | 2 | -1.33 | 1.88 | -0.415 | -0.382 | 1.63 | 83.62 | 623 | -- | -- |
| 151.45 | 0.573 | 7.18 | 0.22 | 1.99 | -1.32 | 1.9 | -- | -0.385 | 1.59 | 83.6 | 622 | -- | -- |
| 164.85 | 0.598 | 7.19 | 0.211 | 1.97 | -1.28 | -- | -0.614 | -0.382 | 1.52 | 83.32 | 641 | -- | -- |
| 165.79 | 0.6 | 7.19 | 0.154 | 1.99 | -1.28 | -- | -- | -0.393 | 1.56 | 83.56 | 622 | -- | -- |
| 307.94 | 0.817 | 7.21 | 0.37 | -- | -2.53 | -- | -0.00163 | -0.463 | -- | 83 | 947 | -- | -- |
| 197.16 | 0.658 | 7.19 | 0.154 | 2.18 | -- | 1.58 | -- | -0.327 | 0.0797 | -- | -- | -- | -- |
| 207.96 | 0.675 | 7.2 | 0.0926 | 2.17 | -- | -- | -- | -0.334 | 0.0434 | -- | -- | -- | -- |
| 307.42 | 0.817 | 7.19 | 0.262 | -- | -2.56 | -- | -- | -0.461 | -- | 83.23 | 944 | -- | -- |
| 166.41 | 0.601 | 7.19 | -- | 2 | -1.28 | -- | -- | -0.411 | 1.56 | 83.45 | 622 | -- | -- |
| 505.1 | 1.05 | 7.15 | 0.161 | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
| 208.18 | 0.675 | 7.2 | -- | 2.17 | -- | -- | -- | -0.344 | 0.0458 | -- | -- | -- | -- |
| 309.23 | 0.819 | 7.19 | -- | -- | -2.55 | -- | -- | -0.489 | -- | 83 | 943 | -- | -- |
| 505.78 | 1.05 | 7.15 | -- | -- | -- | -- | -- | -0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 144.70 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 6 | 20 |
| 7 | 147.02 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 15 | 14 |
| 8 | 147.02 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 15 | 14 |
| 9 | 147.35 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 11 | 148.55 | wind | 7.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 18 | 149.87 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 19 | 150.04 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 21 | 150.15 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 22 | 150.15 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 23 | 150.15 | temperature | 10.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 24 | 150.24 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 10 |
| 25 | 150.24 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 10 |
| 26 | 150.30 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 27 | 150.37 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 15 | 15 |
| 29 | 150.53 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 31 | 150.56 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 33 | 150.61 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 35 | 150.72 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 38 | 151.19 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 6 | 18 |
| 39 | 151.35 | wind | 5.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 41 | 151.42 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 47 | 151.99 | wind | 7.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 51 | 152.06 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 52 | 152.10 | wind | 9.0 | 10 | < th | dose independent | rect. | 15 | 15 |
| 53 | 152.16 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 56 | 152.23 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 9 |
| 59 | 152.25 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 62 | 152.27 | radiation | 20.0 | 10 | < th | dose independent | rect. | 15 | 15 |
| 74 | 152.50 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 78 | 152.55 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 9 |
| 94 | 152.91 | humidity | 80.0 | 1440 | > th | dose independent | sin | 5 | NA |
| 96 | 152.93 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 97 | 152.94 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 9 |
| 99 | 152.94 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 9 |
| 100 | 152.94 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 101 | 152.94 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 15 |
| 102 | 152.94 | radiation | 40.0 | 10 | < th | dose independent | rect. | 15 | 15 |
| 130 | 153.38 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 9 |
| 131 | 153.39 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 9 |
| 133 | 153.39 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 9 |
| 138 | 153.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 22 |
| 142 | 153.47 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 147 | 153.54 | wind | 5.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 148 | 153.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 20 |
| 160 | 153.73 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 4 |
| 161 | 153.73 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 191 | 154.16 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 15 | 14 |
| 199 | 154.27 | humidity | 90.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 205 | 154.40 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 211 | 154.48 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 214 | 154.51 | wind | 1.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 225 | 154.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 228 | 154.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 240 | 154.66 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 242 | 154.66 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 243 | 154.66 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 246 | 154.66 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 247 | 154.66 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 249 | 154.66 | radiation | 20.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 252 | 154.66 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 257 | 154.76 | wind | 5.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 263 | 154.91 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 282 | 155.20 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 290 | 155.26 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 297 | 155.42 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 15 | 15 |
| 300 | 155.50 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 15 | 15 |
| 322 | 155.64 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 20 |
| 343 | 155.71 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 352 | 155.81 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 375 | 156.13 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 9 |
| 376 | 156.13 | humidity | 80.0 | 720 | > th | dose independent | rect. | 3 | 21 |
| 379 | 156.17 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 24 | 6 |
| 382 | 156.17 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 401 | 156.33 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 402 | 156.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 405 | 156.33 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 409 | 156.33 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 414 | 156.33 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 415 | 156.33 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 419 | 156.33 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 439 | 156.62 | temperature | 15.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 449 | 156.67 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 453 | 156.69 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 456 | 156.71 | temperature | 30.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 457 | 156.71 | humidity | 50.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 460 | 156.71 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 461 | 156.71 | radiation | 20.0 | 10 | < th | dose independent | rect. | 24 | 6 |
| 464 | 156.71 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 483 | 156.87 | humidity | 80.0 | 720 | < th | dose independent | rect. | 15 | 21 |
| 491 | 156.92 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 492 | 156.93 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 9 |
| 510 | 157.09 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 20 |
| 511 | 157.09 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 515 | 157.14 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 15 | 15 |
| 518 | 157.19 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 20 |
| 525 | 157.28 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 2 |
| 527 | 157.28 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 536 | 157.38 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 17 |
| 565 | 157.55 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 582 | 157.65 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 586 | 157.67 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 18 |
| 594 | 157.76 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 603 | 157.82 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 605 | 157.83 | wind | 9.0 | 30 | < th | dose dependent | rect. | 15 | 15 |
| 610 | 157.88 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 613 | 157.89 | humidity | 50.0 | 10 | > th | dose independent | rect. | 15 | 15 |
| 632 | 158.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 635 | 158.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 639 | 158.00 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 644 | 158.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 645 | 158.00 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 649 | 158.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 18 |
| 656 | 158.03 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 661 | 158.05 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 696 | 158.26 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 699 | 158.28 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 706 | 158.32 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 709 | 158.32 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 712 | 158.32 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 2 |
| 713 | 158.32 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 715 | 158.32 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 719 | 158.32 | temperature | 10.0 | 90 | > th | dose independent | rect. | 5 | 22 |
| 723 | 158.34 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 2 |
| 729 | 158.36 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 2 |
| 731 | 158.36 | humidity | 80.0 | 720 | > th | dose independent | rect. | 15 | 19 |
| 738 | 158.41 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 22 |
| 740 | 158.41 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 741 | 158.41 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 24 | 6 |
| 753 | 158.47 | humidity | 80.0 | 30 | > th | dose independent | rect. | 6 | 18 |
| 772 | 158.51 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 783 | 158.51 | humidity | 50.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 809 | 158.64 | humidity | 80.0 | 720 | > th | dose independent | rect. | 18 | 21 |
| 816 | 158.66 | humidity | 80.0 | 720 | > th | dose independent | rect. | 12 | 22 |
| 846 | 158.80 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 18 |
| 850 | 158.80 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 865 | 158.88 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 866 | 158.88 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 10 |
| 900 | 159.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 2 |
| 910 | 159.05 | wind | 9.0 | 90 | < th | dose independent | rect. | 5 | 22 |
| 919 | 159.08 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 11 | 22 |
| 953 | 159.18 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 971 | 159.22 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 999 | 159.32 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 12 |