Os03g0790700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde oxidase-2.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0790700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Aldehyde oxidase-2.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.42 | 0.327 | 13.3 | 1.32 | 0.918 | -0.688 | -0.0501 | 0.596 | 0.259 | 3.4 | 21.1 | 1954 | -- | -- |
| 49.32 | 0.327 | 13.3 | 1.23 | 0.927 | -0.78 | 0.0219 | -- | 0.249 | 3.35 | 21.15 | 2020 | -- | -- |
| 48.41 | 0.324 | 13.3 | 1.32 | 0.916 | -0.684 | -- | 0.614 | 0.258 | 3.42 | 21.2 | 1915 | -- | -- |
| 49.22 | 0.327 | 13.3 | 1.16 | 0.933 | -0.736 | -- | -- | 0.233 | 3.38 | 21.1 | 1957 | -- | -- |
| 94.68 | 0.456 | 13.3 | 1.07 | -- | -0.511 | -- | 0.367 | 0.18 | -- | 21.2 | 1915 | -- | -- |
| 63.39 | 0.373 | 13.3 | 0.828 | 0.915 | -- | 0.0471 | -- | 0.0223 | 3.55 | -- | -- | -- | -- |
| 63.39 | 0.373 | 13.3 | 0.827 | 0.915 | -- | -- | -- | 0.0221 | 3.54 | -- | -- | -- | -- |
| 95.5 | 0.457 | 13.3 | 0.988 | -- | -0.519 | -- | -- | 0.161 | -- | 21.1 | 1802 | -- | -- |
| 75.83 | 0.406 | 13.3 | -- | 1.03 | -0.358 | -- | -- | 0.0428 | 3.02 | 22.4 | 888 | -- | -- |
| 110.16 | 0.49 | 13.3 | 0.866 | -- | -- | -- | -- | 0.0464 | -- | -- | -- | -- | -- |
| 81.43 | 0.422 | 13.3 | -- | 0.932 | -- | -- | -- | -0.0701 | 3.53 | -- | -- | -- | -- |
| 120.58 | 0.513 | 13.3 | -- | -- | -0.409 | -- | -- | 0.0302 | -- | 21.1 | 1802 | -- | -- |
| 129.93 | 0.532 | 13.3 | -- | -- | -- | -- | -- | -0.0497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.63 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 2 | 41.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 28 | 43.80 | temperature | 10.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 75 | 45.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 80 | 45.49 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 11 |
| 96 | 45.73 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 118 | 46.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 6 |
| 121 | 46.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 122 | 46.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 127 | 46.13 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 129 | 46.17 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 135 | 46.19 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 141 | 46.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 144 | 46.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 147 | 46.23 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 14 |
| 159 | 46.30 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 175 | 46.41 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 195 | 46.48 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 204 | 46.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 209 | 46.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 210 | 46.51 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 224 | 46.56 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 236 | 46.57 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 10 |
| 238 | 46.58 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 250 | 46.60 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 263 | 46.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 264 | 46.66 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 267 | 46.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 270 | 46.68 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 284 | 46.72 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 299 | 46.73 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 300 | 46.73 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 303 | 46.73 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 9 |
| 306 | 46.74 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 309 | 46.74 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 310 | 46.74 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 9 |
| 320 | 46.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 328 | 46.76 | wind | 7.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 335 | 46.76 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 1 | 14 |
| 340 | 46.78 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 350 | 46.80 | temperature | 20.0 | 720 | > th | dose independent | sin | 8 | NA |
| 353 | 46.81 | radiation | 1.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 363 | 46.82 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 366 | 46.83 | radiation | 1.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 367 | 46.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 376 | 46.85 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 399 | 46.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 406 | 46.90 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 16 |
| 408 | 46.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 434 | 46.92 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 23 | 13 |
| 447 | 46.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 455 | 46.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 475 | 46.95 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 17 |
| 524 | 46.99 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 574 | 47.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 586 | 47.05 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 624 | 47.09 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 10 | 22 |
| 644 | 47.11 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 649 | 47.12 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 664 | 47.12 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 670 | 47.13 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 677 | 47.13 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 14 |
| 702 | 47.14 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 706 | 47.14 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 732 | 47.14 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 22 |
| 755 | 47.15 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 763 | 47.15 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 11 |
| 769 | 47.15 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 13 |
| 776 | 47.15 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 15 |
| 875 | 47.19 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 986 | 47.22 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 12 |