Os03g0789800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0789800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.92 | 0.361 | 8.62 | -0.97 | 1.5 | -0.0879 | -1.31 | -2.34 | 0.132 | 22.1 | 0.9998 | 4590 | -- | -- |
| 62.04 | 0.367 | 8.64 | -0.809 | 1.56 | -0.361 | -1.23 | -- | 0.196 | 22.1 | 1.626 | 15663 | -- | -- |
| 65.71 | 0.378 | 8.62 | -0.922 | 1.51 | -0.0598 | -- | -2.34 | 0.125 | 22.1 | 0.9866 | 4590 | -- | -- |
| 68.25 | 0.385 | 8.64 | -0.788 | 1.52 | -0.408 | -- | -- | 0.21 | 22.1 | 1.5 | 17245 | -- | -- |
| 199.6 | 0.658 | 8.56 | -0.755 | -- | 0.274 | -- | -3.33 | 0.149 | -- | 0.9412 | 2940 | -- | -- |
| 66.38 | 0.382 | 8.66 | -0.812 | 1.51 | -- | -1.28 | -- | 0.116 | 22.1 | -- | -- | -- | -- |
| 72.93 | 0.4 | 8.66 | -0.761 | 1.51 | -- | -- | -- | 0.119 | 22.1 | -- | -- | -- | -- |
| 205.99 | 0.668 | 8.61 | -0.933 | -- | -0.645 | -- | -- | 0.161 | -- | 0.4632 | 2130 | -- | -- |
| 84.79 | 0.429 | 8.64 | -- | 1.5 | -0.322 | -- | -- | 0.252 | 22 | 2.957 | 16255 | -- | -- |
| 211.68 | 0.68 | 8.62 | -0.74 | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
| 88.21 | 0.439 | 8.64 | -- | 1.51 | -- | -- | -- | 0.204 | 22.1 | -- | -- | -- | -- |
| 221.89 | 0.694 | 8.58 | -- | -- | -0.323 | -- | -- | 0.219 | -- | 0.5013 | 16238 | -- | -- |
| 226.15 | 0.702 | 8.6 | -- | -- | -- | -- | -- | 0.204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.99 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 3 | 53.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 4 | 53.63 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 5 | 53.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 6 | 53.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 7 | 53.70 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 10 | 53.77 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 11 | 53.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 12 | 53.92 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 13 | 53.92 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 16 | 53.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 20 | 54.06 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 21 | 54.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 22 | 54.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 23 | 54.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 24 | 54.13 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 25 | 54.13 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 26 | 54.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 33 | 54.19 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 36 | 54.22 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 38 | 54.22 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 43 | 54.28 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 12 |
| 44 | 54.28 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 50 | 54.32 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 12 |
| 56 | 54.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 58 | 54.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 59 | 54.40 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 67 | 54.52 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 74 | 54.62 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 79 | 54.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 80 | 54.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 82 | 54.76 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 89 | 54.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 90 | 54.80 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 91 | 54.81 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 93 | 54.81 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 98 | 54.87 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 99 | 54.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 100 | 54.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 4 |
| 104 | 54.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 105 | 54.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 5 |
| 111 | 54.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 114 | 54.92 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 126 | 54.95 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 7 | 6 |
| 143 | 55.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 147 | 55.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 176 | 55.09 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 202 | 55.19 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 208 | 55.21 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 210 | 55.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 225 | 55.29 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 226 | 55.30 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 227 | 55.30 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 228 | 55.30 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 252 | 55.40 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 253 | 55.41 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 273 | 55.47 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 275 | 55.48 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 5 | NA |
| 292 | 55.55 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 294 | 55.55 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 300 | 55.58 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 332 | 55.69 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 338 | 55.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 339 | 55.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 340 | 55.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 341 | 55.72 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 343 | 55.72 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 345 | 55.72 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 357 | 55.78 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 359 | 55.78 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 8 |
| 361 | 55.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 370 | 55.81 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 438 | 55.99 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 454 | 56.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 458 | 56.04 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 462 | 56.06 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 2 | 10 |
| 468 | 56.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 478 | 56.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 479 | 56.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 483 | 56.12 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 484 | 56.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 495 | 56.15 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 499 | 56.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 503 | 56.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 507 | 56.17 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 516 | 56.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 7 |
| 550 | 56.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 575 | 56.33 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 596 | 56.37 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 622 | 56.42 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 10 |
| 628 | 56.44 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 721 | 56.56 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 829 | 56.76 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 855 | 56.79 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 879 | 56.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 904 | 56.85 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 917 | 56.87 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 928 | 56.88 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 971 | 56.93 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 976 | 56.93 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 979 | 56.94 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 981 | 56.95 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 983 | 56.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |