Os03g0789500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0789500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.07 | 0.399 | 8.33 | -1.19 | 0.364 | -0.715 | 0.323 | 1.83 | 0.000946 | 15.1 | 91.62 | 3747 | -- | -- |
| 74.41 | 0.402 | 8.35 | -1.03 | 0.379 | -0.571 | 0.411 | -- | 0.0345 | 14.9 | 92 | 3818 | -- | -- |
| 72.41 | 0.396 | 8.33 | -1.19 | 0.365 | -0.714 | -- | 1.88 | 0.00197 | 15.1 | 91.64 | 3734 | -- | -- |
| 74.93 | 0.403 | 8.35 | -1.01 | 0.367 | -0.573 | -- | -- | 0.0419 | 15.1 | 92.16 | 3815 | -- | -- |
| 79.51 | 0.415 | 8.33 | -1.19 | -- | -0.737 | -- | 1.91 | -0.00843 | -- | 91.74 | 3337 | -- | -- |
| 79.54 | 0.418 | 8.31 | -1.11 | 0.367 | -- | 0.394 | -- | 0.224 | 15.4 | -- | -- | -- | -- |
| 80.01 | 0.419 | 8.31 | -1.11 | 0.371 | -- | -- | -- | 0.226 | 15.6 | -- | -- | -- | -- |
| 82.37 | 0.423 | 8.35 | -1.02 | -- | -0.573 | -- | -- | 0.0355 | -- | 92.19 | 3617 | -- | -- |
| 99.89 | 0.465 | 8.34 | -- | 0.407 | -1.01 | -- | -- | 0.0622 | 14.9 | 91.68 | 3830 | -- | -- |
| 87.69 | 0.438 | 8.31 | -1.12 | -- | -- | -- | -- | 0.216 | -- | -- | -- | -- | -- |
| 112.35 | 0.496 | 8.28 | -- | 0.393 | -- | -- | -- | 0.35 | 15.6 | -- | -- | -- | -- |
| 107.05 | 0.482 | 8.35 | -- | -- | -0.927 | -- | -- | 0.0248 | -- | 91.51 | 4593 | -- | -- |
| 120.97 | 0.513 | 8.28 | -- | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.47 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 2 | 70.59 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 3 | 70.69 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 9 | 71.49 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 15 | 71.58 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 16 | 71.58 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 24 | 71.82 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 13 |
| 26 | 71.84 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 45 | 72.17 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 60 | 72.21 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 90 | 72.45 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 91 | 72.46 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 15 |
| 98 | 72.51 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 127 | 72.67 | temperature | 20.0 | 720 | > th | dose independent | sin | 4 | NA |
| 138 | 72.72 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 11 | 1 |
| 157 | 72.80 | temperature | 20.0 | 720 | < th | dose independent | sin | 4 | NA |
| 169 | 72.83 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 15 |
| 192 | 72.90 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 212 | 72.94 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 2 | 14 |
| 235 | 73.01 | temperature | 25.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 240 | 73.01 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 1 | 18 |
| 255 | 73.05 | temperature | 25.0 | 270 | < th | dose independent | rect. | 10 | 1 |
| 264 | 73.06 | humidity | 90.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 269 | 73.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 273 | 73.07 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 283 | 73.08 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 297 | 73.10 | temperature | 25.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 344 | 73.20 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 353 | 73.21 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 361 | 73.24 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 5 |
| 377 | 73.27 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 3 |
| 465 | 73.42 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 468 | 73.42 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 478 | 73.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 498 | 73.46 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 12 | 22 |
| 523 | 73.49 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 529 | 73.50 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 534 | 73.51 | humidity | 90.0 | 4320 | > th | dose dependent | no | NA | NA |
| 551 | 73.52 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 23 |
| 553 | 73.53 | temperature | 25.0 | 270 | < th | dose independent | rect. | 18 | 13 |
| 562 | 73.54 | radiation | 10.0 | 720 | > th | dose independent | rect. | 11 | 1 |
| 581 | 73.57 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 7 |
| 607 | 73.60 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 609 | 73.60 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 635 | 73.64 | wind | 5.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 645 | 73.65 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 7 | 5 |
| 676 | 73.69 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 693 | 73.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 704 | 73.72 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 732 | 73.75 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 746 | 73.77 | wind | 5.0 | 270 | < th | dose independent | rect. | 17 | 12 |
| 751 | 73.77 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 758 | 73.77 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 18 |
| 768 | 73.79 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 786 | 73.81 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 15 |
| 807 | 73.84 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 809 | 73.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 818 | 73.85 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 823 | 73.86 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 839 | 73.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 856 | 73.90 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 861 | 73.91 | wind | 5.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 863 | 73.91 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 13 |
| 890 | 73.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 895 | 73.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 901 | 73.94 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 905 | 73.94 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 910 | 73.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 911 | 73.95 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 915 | 73.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 919 | 73.95 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 924 | 73.96 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 983 | 74.01 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 13 |