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Os03g0789200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF593 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0178) R2 : 0.541
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.08 (0.0466) R2dC : 0.544 R2C : 0.541
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00609 (0.0374) R2dN8 : 3.44e-05 R2N8 : -0.0029
σ : 0.336
deviance : 51.48
__
_____
C
peak time of C : 6.45
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.98 0.286 11.3 0.212 0.776 -1.02 0.418 0.0524 0.157 6.45 16.11 473 -- --
36.96 0.283 11.3 0.215 0.78 -1 0.393 -- 0.155 6.43 16.6 478 -- --
37.37 0.285 11.3 0.217 0.764 -1.02 -- -0.032 0.157 6.43 16.38 473 -- --
37.34 0.285 11.3 0.208 0.768 -0.983 -- -- 0.155 6.48 17.26 469 -- --
59.86 0.36 11.3 0.419 -- -1.64 -- -0.0102 0.246 -- 17.43 442 -- --
50.48 0.333 11.3 -0.0424 1.08 -- 0.622 -- -0.0079 6.45 -- -- -- --
51.45 0.336 11.3 -0.034 1.08 -- -- -- -0.00988 6.45 -- -- -- --
59.46 0.359 11.3 0.35 -- -1.51 -- -- 0.268 -- 18.91 445 -- --
38.39 0.289 11.3 -- 0.796 -0.934 -- -- 0.128 6.46 16.91 466 -- --
112.1 0.495 11.3 -0.00654 -- -- -- -- 0.0128 -- -- -- -- --
51.48 0.336 11.3 -- 1.08 -- -- -- -0.00609 6.45 -- -- -- --
60.53 0.362 11.3 -- -- -1.32 -- -- 0.12 -- 24.2 454 -- --
112.1 0.494 11.3 -- -- -- -- -- 0.0135 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.57 temperature 15.0 270 > th dose dependent rect. 12 21
11 35.57 temperature 20.0 270 > th dose independent rect. 12 20
30 36.22 temperature 30.0 270 < th dose dependent rect. 7 20
33 36.34 humidity 50.0 14400 > th dose dependent rect. 22 1
36 36.38 humidity 90.0 14400 > th dose dependent rect. 6 1
39 36.46 temperature 20.0 90 > th dose independent rect. 15 18
40 36.46 humidity 80.0 14400 > th dose dependent rect. 21 3
41 36.46 humidity 80.0 14400 > th dose dependent rect. 20 5
43 36.48 temperature 20.0 270 > th dose independent rect. 23 9
44 36.49 humidity 80.0 14400 > th dose dependent rect. 18 14
48 36.54 temperature 30.0 270 < th dose dependent rect. 18 19
55 36.58 atmosphere 1000.0 43200 < th dose dependent rect. 12 1
56 36.60 atmosphere 1000.0 43200 < th dose dependent rect. 7 8
59 36.61 humidity 50.0 14400 > th dose dependent rect. 18 13
61 36.62 temperature 20.0 1440 > th dose dependent rect. 8 1
64 36.62 atmosphere 1000.0 43200 < th dose dependent rect. 9 6
69 36.64 humidity 80.0 14400 > th dose dependent rect. 19 8
74 36.65 radiation 1.0 14400 > th dose independent rect. 4 2
91 36.66 humidity 80.0 14400 > th dose dependent rect. 18 11
95 36.67 temperature 10.0 1440 > th dose dependent rect. 6 3
96 36.68 radiation 1.0 14400 < th dose independent rect. 19 11
103 36.69 radiation 1.0 14400 < th dose independent rect. 23 7
112 36.70 humidity 50.0 14400 > th dose dependent rect. 21 3
117 36.71 radiation 1.0 14400 < th dose independent rect. 4 2
123 36.72 humidity 80.0 14400 > th dose independent rect. 18 2
172 36.82 humidity 80.0 14400 > th dose dependent sin 12 NA
173 36.82 temperature 30.0 1440 < th dose dependent rect. 6 3
182 36.83 radiation 40.0 14400 < th dose dependent rect. 18 11
227 36.92 radiation 30.0 14400 < th dose dependent rect. 18 7
263 36.97 wind 9.0 43200 < th dose independent rect. 20 16
291 37.01 wind 9.0 43200 > th dose independent rect. 20 16
302 37.02 precipitation 0.1 43200 < th dose independent rect. 6 3
304 37.02 precipitation 0.1 43200 < th dose dependent rect. 6 3
322 37.05 radiation 10.0 14400 < th dose dependent rect. 18 2
351 37.09 atmosphere 995.0 43200 < th dose dependent rect. 14 9
356 37.09 temperature 10.0 720 > th dose dependent rect. 19 22
362 37.10 humidity 50.0 14400 > th dose dependent rect. 20 7
385 37.12 temperature 10.0 270 > th dose dependent rect. 3 15
411 37.16 wind 1.0 43200 > th dose dependent rect. 8 1
448 37.20 temperature 10.0 270 > th dose dependent rect. 22 10
452 37.21 humidity 80.0 14400 < th dose independent rect. 18 2
453 37.21 precipitation 0.1 43200 > th dose dependent rect. 6 3
462 37.23 precipitation 0.1 43200 > th dose independent rect. 6 3
464 37.23 wind 9.0 43200 < th dose dependent rect. 8 1
491 37.27 atmosphere 1000.0 43200 < th dose dependent sin 0 NA
571 37.37 atmosphere 995.0 43200 < th dose dependent rect. 13 11
580 37.39 humidity 70.0 14400 < th dose independent rect. 14 1
610 37.43 wind 9.0 43200 > th dose independent rect. 20 12
624 37.44 wind 9.0 43200 < th dose independent rect. 20 13
625 37.44 atmosphere 995.0 43200 > th dose independent rect. 2 14
642 37.45 wind 7.0 43200 > th dose dependent rect. 20 16
659 37.47 atmosphere 995.0 43200 < th dose independent rect. 2 14
671 37.48 humidity 80.0 14400 > th dose dependent rect. 5 3
677 37.48 precipitation 0.1 43200 > th dose dependent rect. 2 16
693 37.50 atmosphere 995.0 43200 < th dose independent rect. 7 19
698 37.51 atmosphere 995.0 43200 < th dose independent rect. 4 20
701 37.51 wind 5.0 43200 > th dose dependent rect. 5 6
735 37.54 precipitation 0.1 43200 < th dose independent rect. 24 9
736 37.54 atmosphere 995.0 43200 > th dose independent rect. 4 20
743 37.54 precipitation 0.1 43200 < th dose dependent rect. 24 9
745 37.55 atmosphere 995.0 43200 > th dose independent rect. 7 19
755 37.56 precipitation 0.1 43200 > th dose dependent rect. 24 9
759 37.57 precipitation 0.1 43200 > th dose independent rect. 24 9
788 37.60 atmosphere 995.0 43200 < th dose independent rect. 9 16
796 37.61 precipitation 0.1 43200 > th dose independent rect. 24 7
802 37.61 precipitation 0.1 43200 > th dose dependent rect. 24 7
809 37.62 precipitation 0.1 43200 < th dose independent rect. 24 7
814 37.62 precipitation 0.1 43200 < th dose dependent rect. 24 7
835 37.64 atmosphere 995.0 43200 > th dose independent sin 3 NA
838 37.64 wind 7.0 43200 > th dose dependent rect. 9 3
948 37.72 atmosphere 995.0 43200 > th dose independent rect. 9 16
953 37.73 atmosphere 995.0 43200 < th dose independent sin 3 NA
954 37.73 radiation 10.0 1440 < th dose independent rect. 16 2
968 37.73 temperature 10.0 720 > th dose dependent rect. 4 22
972 37.74 wind 5.0 43200 > th dose dependent rect. 6 1
985 37.75 humidity 70.0 14400 > th dose independent rect. 14 1
994 37.76 radiation 10.0 4320 < th dose independent rect. 16 15