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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0788400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.69 (0.0277) R2 : 0.000385
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0245 (0.0584) R2dN8 : 0.000498 R2N8 : 0.000385
σ : 0.522
deviance : 125.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
110.62 0.494 3.66 0.488 0.307 0.401 -0.00922 -0.61 0.102 6.98 1011 12 -- --
111.63 0.496 3.67 0.445 0.307 0.412 -0.0303 -- 0.0941 6.97 1011 13 -- --
110.62 0.49 3.66 0.487 0.307 0.402 -- -0.614 0.102 6.99 1011 15 -- --
111.63 0.495 3.67 0.445 0.307 0.412 -- -- 0.0942 6.97 1011 17 -- --
115.57 0.501 3.67 0.495 -- 0.409 -- -0.609 0.109 -- 1011 17 -- --
115.1 0.503 3.67 0.422 0.312 -- -0.0432 -- 0.0663 7.15 -- -- -- --
115.11 0.502 3.67 0.421 0.312 -- -- -- 0.0664 7.15 -- -- -- --
116.55 0.503 3.67 0.45 -- 0.424 -- -- 0.101 -- 1011 64 -- --
116.78 0.503 3.68 -- 0.313 0.388 -- -- 0.0427 6.9 1011 21 -- --
120.25 0.512 3.68 0.427 -- -- -- -- 0.0719 -- -- -- -- --
119.79 0.512 3.68 -- 0.317 -- -- -- 0.0194 7.06 -- -- -- --
121.83 0.514 3.69 -- -- 0.398 -- -- 0.0493 -- 1011 125 -- --
125.07 0.522 3.69 -- -- -- -- -- 0.0245 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 103.42 atmosphere 1005.0 90 > th dose dependent rect. 2 1
2 104.43 temperature 10.0 30 > th dose dependent rect. 3 23
3 104.44 atmosphere 1005.0 10 > th dose dependent rect. 2 2
4 104.46 temperature 25.0 90 > th dose dependent rect. 1 1
5 104.48 temperature 15.0 30 > th dose independent rect. 3 23
9 104.66 humidity 90.0 30 > th dose dependent rect. 2 1
10 104.68 temperature 25.0 90 > th dose independent rect. 1 1
13 104.73 humidity 90.0 30 > th dose independent rect. 2 1
14 104.74 wind 3.0 30 < th dose dependent rect. 2 1
15 104.76 wind 1.0 30 < th dose independent rect. 2 1
33 104.82 atmosphere 1015.0 30 < th dose dependent rect. 2 1
35 104.83 temperature 10.0 30 > th dose independent rect. 2 1
37 104.83 temperature 30.0 30 < th dose independent rect. 2 1
38 104.83 humidity 50.0 30 > th dose independent rect. 2 1
41 104.83 atmosphere 995.0 30 > th dose independent rect. 2 1
42 104.83 atmosphere 1010.0 30 < th dose independent rect. 2 1
44 104.83 radiation 1.0 30 < th dose independent rect. 2 1
49 104.83 precipitation 0.1 30 < th dose independent rect. 2 1
52 104.83 atmosphere 995.0 30 > th dose dependent rect. 2 1
54 104.83 radiation 1.0 30 < th dose dependent rect. 2 1
59 104.83 precipitation 0.1 30 < th dose dependent rect. 2 1
61 104.85 atmosphere 1005.0 30 > th dose independent rect. 2 1
66 104.88 atmosphere 995.0 30 > th dose independent rect. 3 23
76 104.97 temperature 30.0 30 < th dose dependent rect. 2 1
78 104.99 wind 1.0 30 > th dose independent rect. 2 1
82 105.02 precipitation 0.1 30 < th dose independent rect. 3 23
83 105.02 precipitation 0.1 30 < th dose dependent rect. 3 23
84 105.03 wind 9.0 30 < th dose independent rect. 3 23
117 105.20 radiation 10.0 43200 < th dose dependent rect. 3 1
124 105.24 wind 9.0 1440 < th dose independent rect. 3 1
125 105.24 temperature 10.0 1440 > th dose independent rect. 3 1
129 105.24 temperature 30.0 1440 < th dose independent rect. 3 1
133 105.24 humidity 50.0 1440 > th dose independent rect. 3 1
143 105.24 atmosphere 995.0 1440 > th dose independent rect. 3 1
144 105.24 radiation 1.0 1440 < th dose independent rect. 3 1
164 105.24 temperature 10.0 1440 > th dose independent rect. 4 23
167 105.24 radiation 1.0 1440 < th dose dependent rect. 3 1
188 105.99 humidity 50.0 30 > th dose independent rect. 3 23
197 106.71 temperature 15.0 30 > th dose dependent rect. 3 17
200 106.92 atmosphere 1010.0 30 < th dose independent rect. 3 23
204 107.03 temperature 20.0 720 > th dose dependent rect. 3 1
211 107.21 humidity 90.0 90 < th dose independent rect. 2 1
220 107.54 temperature 25.0 720 > th dose independent rect. 3 5
225 107.62 humidity 60.0 90 > th dose dependent rect. 9 18
242 107.93 temperature 25.0 720 > th dose dependent rect. 3 5
247 108.02 humidity 80.0 90 > th dose independent rect. 8 19
260 108.18 radiation 20.0 10 < th dose dependent rect. 3 23
276 108.37 atmosphere 1000.0 90 > th dose independent rect. 3 6
279 108.41 radiation 40.0 10 < th dose dependent rect. 3 23
282 108.44 temperature 25.0 720 > th dose independent rect. 6 1
287 108.49 atmosphere 995.0 10 > th dose dependent rect. 20 8
290 108.51 wind 1.0 30 < th dose independent rect. 24 3
294 108.52 atmosphere 1005.0 30 > th dose dependent rect. 11 17
295 108.53 radiation 20.0 4320 > th dose independent rect. 6 2
311 108.55 atmosphere 1000.0 30 > th dose independent rect. 3 8
327 108.61 temperature 15.0 90 > th dose dependent rect. 3 8
358 108.65 wind 3.0 30 < th dose dependent rect. 24 3
369 108.74 temperature 15.0 90 > th dose independent rect. 3 16
372 108.77 wind 1.0 90 < th dose dependent rect. 8 1
385 108.81 radiation 10.0 10 < th dose independent rect. 3 23
388 108.82 humidity 70.0 30 > th dose dependent rect. 20 7
398 108.87 atmosphere 1015.0 1440 < th dose independent rect. 3 1
399 108.87 humidity 90.0 10 > th dose independent rect. 22 5
401 108.87 wind 7.0 30 < th dose dependent rect. 20 7
411 108.91 humidity 90.0 14400 > th dose independent rect. 3 4
434 109.02 atmosphere 995.0 30 > th dose dependent rect. 3 8
435 109.04 atmosphere 995.0 90 > th dose dependent rect. 3 6
437 109.05 temperature 25.0 270 > th dose dependent rect. 23 4
440 109.07 temperature 15.0 1440 > th dose independent rect. 21 7
453 109.10 temperature 30.0 270 < th dose dependent rect. 7 6
455 109.11 radiation 1.0 4320 > th dose dependent rect. 7 1
461 109.12 humidity 90.0 14400 > th dose independent rect. 2 6
462 109.12 wind 5.0 30 < th dose independent rect. 20 7
463 109.12 radiation 40.0 4320 < th dose dependent rect. 7 1
469 109.14 temperature 25.0 270 > th dose independent rect. 22 5
478 109.17 radiation 40.0 90 < th dose dependent rect. 3 6
482 109.18 humidity 80.0 30 > th dose independent rect. 20 7
490 109.20 radiation 10.0 90 < th dose independent rect. 3 5
530 109.30 temperature 30.0 30 < th dose independent rect. 3 23
535 109.31 humidity 50.0 90 > th dose dependent rect. 17 10
545 109.33 temperature 10.0 90 > th dose dependent rect. 3 6
553 109.35 atmosphere 1005.0 30 > th dose dependent rect. 11 19
556 109.36 humidity 90.0 14400 > th dose dependent rect. 3 5
564 109.38 radiation 30.0 30 < th dose independent rect. 3 8
565 109.38 precipitation 0.1 30 < th dose independent rect. 3 17
571 109.38 precipitation 0.1 30 < th dose dependent rect. 3 17
575 109.39 temperature 15.0 270 > th dose independent rect. 3 14
576 109.39 radiation 20.0 4320 > th dose dependent rect. 6 2
594 109.40 humidity 90.0 14400 > th dose dependent rect. 19 11
595 109.40 atmosphere 995.0 30 > th dose dependent rect. 11 16
603 109.41 radiation 40.0 10 < th dose dependent rect. 3 8
618 109.44 precipitation 0.1 90 < th dose independent rect. 3 6
619 109.44 temperature 30.0 270 < th dose dependent rect. 9 1
621 109.44 precipitation 0.1 90 < th dose dependent rect. 3 6
625 109.44 humidity 90.0 14400 > th dose dependent rect. 24 10
626 109.45 radiation 20.0 10 < th dose independent rect. 3 6
634 109.46 wind 7.0 90 < th dose independent rect. 3 16
640 109.47 wind 1.0 270 > th dose independent rect. 3 2
645 109.48 temperature 15.0 90 > th dose independent rect. 3 8
646 109.48 humidity 90.0 14400 > th dose dependent sin 9 NA
671 109.51 temperature 15.0 1440 > th dose independent rect. 23 5
686 109.52 atmosphere 995.0 30 > th dose independent rect. 3 17
699 109.53 atmosphere 1010.0 90 < th dose independent rect. 3 17
705 109.53 temperature 10.0 720 > th dose dependent rect. 3 12
714 109.55 wind 9.0 90 < th dose independent rect. 3 6
715 109.55 temperature 10.0 90 > th dose independent rect. 3 6
717 109.55 humidity 50.0 90 > th dose independent rect. 3 6
719 109.55 atmosphere 1015.0 90 < th dose independent rect. 3 6
720 109.55 temperature 10.0 90 > th dose independent rect. 9 18
722 109.55 humidity 90.0 14400 > th dose dependent rect. 4 3
736 109.57 radiation 40.0 90 < th dose independent rect. 3 6
746 109.57 humidity 50.0 270 > th dose dependent rect. 7 7
758 109.59 radiation 10.0 4320 < th dose independent rect. 2 8
781 109.60 radiation 10.0 4320 < th dose independent rect. 5 5
793 109.61 humidity 60.0 4320 < th dose independent rect. 18 1
830 109.64 wind 9.0 90 < th dose dependent rect. 7 20
835 109.65 precipitation 0.1 30 < th dose independent rect. 3 8
840 109.65 precipitation 0.1 30 < th dose dependent rect. 3 8
854 109.67 precipitation 0.1 30 < th dose independent rect. 20 7
858 109.67 precipitation 0.1 30 < th dose dependent rect. 20 7
885 109.70 wind 9.0 30 < th dose dependent rect. 9 18
889 109.71 atmosphere 1000.0 30 > th dose independent rect. 20 7
896 109.71 humidity 50.0 90 > th dose dependent rect. 3 6
905 109.72 temperature 30.0 90 < th dose independent rect. 3 6
906 109.72 humidity 90.0 10 > th dose independent rect. 11 16
908 109.72 wind 9.0 90 < th dose independent rect. 9 18
929 109.74 humidity 70.0 270 > th dose dependent rect. 9 1
940 109.74 radiation 1.0 30 < th dose dependent rect. 20 7
955 109.75 temperature 10.0 30 > th dose independent rect. 20 7
956 109.75 temperature 30.0 30 < th dose independent rect. 20 7
957 109.75 humidity 50.0 30 > th dose independent rect. 20 7
961 109.75 radiation 1.0 30 < th dose independent rect. 20 7
990 109.76 radiation 1.0 270 < th dose independent rect. 7 20
996 109.76 temperature 30.0 10 < th dose dependent rect. 2 12