Os03g0785100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0785100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.01 | 0.342 | 15.5 | 0.792 | 0.818 | -0.926 | 0.78 | -0.554 | 0.554 | 23 | 25.1 | 203 | -- | -- |
| 53.4 | 0.34 | 15.5 | 0.704 | 0.815 | -0.871 | 0.698 | -- | 0.538 | 22.9 | 25.2 | 186 | -- | -- |
| 55.39 | 0.347 | 15.5 | 0.706 | 0.826 | -0.882 | -- | -0.14 | 0.543 | 22.9 | 25.1 | 174 | -- | -- |
| 55.43 | 0.347 | 15.5 | 0.688 | 0.825 | -0.87 | -- | -- | 0.539 | 22.9 | 25.1 | 180 | -- | -- |
| 82.3 | 0.423 | 15.5 | 0.78 | -- | -1.13 | -- | -1.17 | 0.51 | -- | 26.72 | 727 | -- | -- |
| 64.51 | 0.377 | 15.5 | 0.926 | 0.765 | -- | 0.681 | -- | 0.713 | 22.3 | -- | -- | -- | -- |
| 66.36 | 0.381 | 15.5 | 0.899 | 0.763 | -- | -- | -- | 0.711 | 22.2 | -- | -- | -- | -- |
| 84.04 | 0.427 | 15.5 | 0.626 | -- | -1.07 | -- | -- | 0.513 | -- | 28.3 | 753 | -- | -- |
| 66.38 | 0.379 | 15.5 | -- | 0.814 | -1.13 | -- | -- | 0.42 | 23.2 | 25.09 | 204 | -- | -- |
| 101.74 | 0.471 | 15.4 | 0.911 | -- | -- | -- | -- | 0.713 | -- | -- | -- | -- | -- |
| 87.68 | 0.438 | 15.5 | -- | 0.768 | -- | -- | -- | 0.611 | 22.3 | -- | -- | -- | -- |
| 92.78 | 0.449 | 15.5 | -- | -- | -1.27 | -- | -- | 0.377 | -- | 27.6 | 762 | -- | -- |
| 123.61 | 0.519 | 15.5 | -- | -- | -- | -- | -- | 0.612 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.85 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 5 | 50.61 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 6 | 50.65 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 10 | 50.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 32 | 51.09 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 16 |
| 33 | 51.12 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 35 | 51.14 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 44 | 51.24 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 9 |
| 64 | 51.51 | temperature | 20 | 270 | < th | dose independent | rect. | 21 | 9 |
| 72 | 51.55 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 89 | 51.74 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 21 |
| 93 | 51.77 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 9 |
| 95 | 51.78 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 19 |
| 110 | 51.86 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 145 | 51.99 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 173 | 52.13 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 7 |
| 225 | 52.39 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 11 |
| 262 | 52.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 7 |
| 268 | 52.57 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 16 |
| 355 | 52.90 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 363 | 52.93 | temperature | 20 | 10 | < th | dose independent | sin | 8 | NA |
| 366 | 52.93 | temperature | 20 | 10 | > th | dose independent | rect. | 11 | 18 |
| 390 | 52.99 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 433 | 53.12 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 22 |
| 444 | 53.14 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 510 | 53.31 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 22 |
| 515 | 53.31 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 546 | 53.37 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 18 |
| 569 | 53.41 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 606 | 53.48 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 14 |
| 663 | 53.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 1 |
| 676 | 53.61 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 14 |
| 814 | 53.84 | temperature | 20 | 10 | < th | dose independent | rect. | 19 | 11 |
| 840 | 53.89 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 878 | 53.99 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 990 | 54.17 | temperature | 25 | 720 | < th | dose dependent | sin | 16 | NA |