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Os03g0784900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0112) R2 : 0.292
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.324 (0.0236) R2dN8 : 0.378 R2N8 : 0.292
σ : 0.211
deviance : 20.52
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.88 0.169 13.1 0.0135 0.18 -0.946 0.351 -0.953 0.259 23.6 20.41 6072 -- --
13.1 0.169 13.1 -0.00617 0.177 -0.57 0.35 -- 0.248 23.6 21.24 6070 -- --
13.28 0.17 13.1 -0.0176 0.19 -1.43 -- -1.95 0.264 22.8 19.29 6014 -- --
13.56 0.171 13.1 -0.0145 0.179 -0.573 -- -- 0.246 22.8 21.2 6030 -- --
15.37 0.183 13 -0.00932 -- -1.37 -- -1.83 0.269 -- 19.43 6093 -- --
15.89 0.187 13.1 0.283 0.183 -- 0.371 -- 0.354 23.7 -- -- -- --
16.42 0.19 13.1 0.269 0.185 -- -- -- 0.353 22.9 -- -- -- --
15.64 0.184 13.1 -0.0113 -- -0.564 -- -- 0.248 -- 21.46 6112 -- --
13.55 0.171 13.1 -- 0.184 -0.555 -- -- 0.253 22.8 21.21 6020 -- --
18.55 0.201 13.1 0.273 -- -- -- -- 0.355 -- -- -- -- --
18.32 0.2 13.1 -- 0.188 -- -- -- 0.324 23 -- -- -- --
15.64 0.184 13.1 -- -- -0.55 -- -- 0.246 -- 21.64 6097 -- --
20.52 0.211 13.1 -- -- -- -- -- 0.324 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.84 wind 7 14400 < th dose independent rect. 18 1
2 11.92 wind 7 14400 > th dose independent rect. 18 1
3 11.97 wind 5 14400 > th dose dependent rect. 18 1
5 12.03 wind 9 14400 < th dose independent rect. 16 3
8 12.17 wind 9 14400 < th dose independent rect. 16 1
9 12.17 wind 9 14400 > th dose independent rect. 16 3
13 12.21 wind 9 14400 > th dose dependent rect. 16 1
18 12.30 wind 7 14400 > th dose dependent rect. 16 4
19 12.31 temperature 20 270 > th dose dependent rect. 17 10
22 12.32 temperature 20 30 > th dose dependent rect. 18 11
26 12.37 temperature 25 720 < th dose independent rect. 16 8
27 12.37 temperature 25 270 > th dose independent rect. 16 14
31 12.39 temperature 25 270 > th dose independent rect. 16 10
32 12.39 radiation 1 720 < th dose dependent rect. 16 8
42 12.47 temperature 25 270 < th dose independent rect. 16 14
53 12.50 radiation 1 720 < th dose independent rect. 16 8
59 12.52 wind 5 43200 < th dose dependent rect. 10 1
65 12.55 wind 7 14400 < th dose independent rect. 24 13
69 12.56 wind 7 14400 < th dose independent rect. 5 7
81 12.58 wind 7 14400 > th dose independent rect. 24 13
83 12.58 humidity 50 43200 < th dose dependent rect. 9 1
86 12.59 wind 3 43200 < th dose independent rect. 10 1
97 12.60 humidity 70 1440 > th dose independent rect. 9 2
100 12.60 wind 7 14400 > th dose independent rect. 5 7
107 12.61 temperature 25 270 > th dose independent sin 13 NA
117 12.61 wind 9 14400 > th dose independent rect. 16 20
118 12.61 wind 1 43200 < th dose dependent rect. 3 23
119 12.62 temperature 25 270 < th dose independent sin 13 NA
120 12.62 wind 5 14400 > th dose independent rect. 10 2
129 12.62 humidity 60 43200 < th dose independent rect. 24 9
131 12.62 wind 5 14400 > th dose dependent rect. 10 2
134 12.63 temperature 25 720 > th dose independent rect. 16 3
147 12.63 wind 1 43200 < th dose dependent rect. 9 21
150 12.64 humidity 60 43200 < th dose independent rect. 2 7
161 12.64 temperature 30 270 < th dose dependent rect. 17 13
173 12.65 wind 9 14400 < th dose independent rect. 16 11
181 12.66 temperature 25 90 < th dose independent sin 11 NA
184 12.66 wind 7 14400 < th dose independent rect. 7 6
197 12.66 wind 1 43200 > th dose independent rect. 18 19
218 12.67 humidity 70 43200 < th dose dependent rect. 1 8
219 12.67 humidity 60 43200 < th dose dependent rect. 24 10
225 12.68 humidity 60 43200 > th dose independent rect. 1 8
235 12.68 wind 1 43200 > th dose independent rect. 20 17
248 12.69 radiation 1 720 > th dose independent rect. 17 1
262 12.69 wind 9 14400 < th dose independent rect. 16 20
272 12.70 wind 7 14400 > th dose independent rect. 7 5
291 12.70 wind 7 14400 > th dose dependent rect. 3 9
294 12.70 wind 7 14400 > th dose dependent rect. 24 12
297 12.70 wind 5 14400 > th dose dependent rect. 24 14
298 12.70 wind 1 43200 < th dose dependent rect. 16 22
299 12.70 wind 1 43200 < th dose dependent rect. 23 23
308 12.71 humidity 50 43200 < th dose dependent rect. 6 4
312 12.71 wind 5 14400 > th dose dependent rect. 5 8
333 12.71 wind 1 43200 < th dose dependent rect. 19 22
346 12.72 temperature 20 720 > th dose dependent rect. 17 2
349 12.72 temperature 20 720 > th dose dependent rect. 15 6
353 12.72 temperature 20 720 > th dose dependent rect. 15 8
356 12.72 wind 7 14400 > th dose dependent rect. 22 16
393 12.74 wind 1 43200 < th dose dependent no NA NA
413 12.75 humidity 70 1440 < th dose independent rect. 9 2
420 12.75 wind 1 43200 > th dose independent rect. 11 19
433 12.75 wind 1 43200 < th dose dependent rect. 21 20
451 12.76 temperature 20 270 > th dose dependent sin 13 NA
452 12.76 humidity 50 43200 < th dose dependent sin 8 NA
471 12.77 temperature 20 90 > th dose dependent sin 11 NA
486 12.78 temperature 25 720 < th dose independent sin 16 NA
487 12.78 temperature 15 14400 > th dose independent rect. 8 3
505 12.78 wind 1 43200 < th dose independent rect. 19 18
508 12.78 wind 7 14400 > th dose dependent sin 6 NA
546 12.80 temperature 15 14400 < th dose independent rect. 9 1
559 12.80 temperature 30 90 < th dose dependent sin 10 NA
572 12.80 wind 9 14400 > th dose dependent rect. 16 20
574 12.81 wind 7 14400 > th dose independent sin 5 NA
576 12.81 wind 7 14400 < th dose independent sin 5 NA
595 12.81 wind 1 43200 < th dose independent rect. 10 20
643 12.82 wind 9 14400 > th dose dependent rect. 14 22
645 12.83 temperature 15 14400 > th dose independent rect. 9 1
673 12.84 wind 9 14400 > th dose independent sin 14 NA
678 12.84 atmosphere 1015 43200 > th dose independent rect. 8 2
679 12.84 atmosphere 1015 43200 < th dose independent rect. 8 2
693 12.84 wind 5 14400 > th dose dependent rect. 24 1
712 12.84 wind 1 43200 < th dose dependent rect. 19 19
715 12.85 temperature 25 720 > th dose independent sin 17 NA
736 12.85 temperature 10 90 > th dose dependent sin 11 NA
740 12.85 temperature 30 720 < th dose dependent rect. 17 5
744 12.85 temperature 10 720 > th dose dependent rect. 15 8
754 12.85 temperature 30 90 < th dose dependent rect. 19 14
755 12.85 radiation 10 4320 > th dose dependent rect. 17 14
760 12.85 temperature 25 720 > th dose dependent rect. 15 17
765 12.86 wind 9 14400 < th dose independent sin 14 NA
767 12.86 wind 7 14400 > th dose independent rect. 4 2
773 12.86 temperature 15 14400 > th dose independent rect. 6 6
842 12.87 temperature 30 720 < th dose dependent rect. 19 3
864 12.87 wind 1 43200 < th dose dependent rect. 21 17
874 12.88 wind 7 14400 > th dose independent rect. 24 1
893 12.88 wind 9 14400 > th dose dependent sin 14 NA
928 12.89 wind 5 14400 < th dose independent rect. 21 2
939 12.89 temperature 15 14400 < th dose independent rect. 5 7
964 12.89 wind 1 43200 < th dose independent rect. 8 22
998 12.89 wind 1 43200 < th dose dependent rect. 11 23