Os03g0782400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0782400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.8 | 0.635 | 2.95 | -0.251 | 0.0215 | 0.814 | 0.201 | -1.6 | -0.000576 | 10.5 | 7.164 | 789 | -- | -- |
| 183.12 | 0.63 | 2.97 | -0.22 | 0.0321 | 1.15 | 0.268 | -- | -0.00872 | 10.5 | 7.2 | 789 | -- | -- |
| 182.92 | 0.63 | 2.95 | -0.238 | 0.0335 | 0.811 | -- | -1.8 | -0.00172 | 13.9 | 7.2 | 789 | -- | -- |
| 183.35 | 0.631 | 2.97 | -0.204 | 0.0392 | 1.17 | -- | -- | -0.00821 | 13.4 | 7.153 | 789 | -- | -- |
| 182.98 | 0.63 | 2.95 | -0.248 | -- | 0.757 | -- | -1.9 | 0.00187 | -- | 7.18 | 789 | -- | -- |
| 190.99 | 0.648 | 2.99 | -0.417 | 0.0727 | -- | -0.512 | -- | -0.0665 | 21.2 | -- | -- | -- | -- |
| 191.91 | 0.649 | 2.99 | -0.398 | 0.0767 | -- | -- | -- | -0.0657 | 20.6 | -- | -- | -- | -- |
| 183.46 | 0.631 | 2.97 | -0.211 | -- | 1.15 | -- | -- | -0.00801 | -- | 7.194 | 789 | -- | -- |
| 184.45 | 0.633 | 2.97 | -- | 0.0296 | 1.26 | -- | -- | 0.01 | 13.3 | 7.176 | 815 | -- | -- |
| 192.24 | 0.648 | 2.98 | -0.399 | -- | -- | -- | -- | -0.0664 | -- | -- | -- | -- | -- |
| 196.09 | 0.655 | 2.98 | -- | 0.0785 | -- | -- | -- | -0.0214 | 20.2 | -- | -- | -- | -- |
| 184.52 | 0.633 | 2.96 | -- | -- | 1.27 | -- | -- | 0.0198 | -- | 7.1 | 789 | -- | -- |
| 196.43 | 0.654 | 2.97 | -- | -- | -- | -- | -- | -0.0222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 169.68 | wind | 9.0 | 270 | > th | dose dependent | rect. | 20 | 3 |
| 4 | 169.71 | wind | 7.0 | 270 | > th | dose dependent | rect. | 20 | 1 |
| 8 | 169.77 | wind | 7.0 | 270 | > th | dose independent | rect. | 20 | 1 |
| 17 | 169.79 | wind | 9.0 | 270 | > th | dose independent | rect. | 20 | 3 |
| 109 | 169.99 | wind | 9.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 233 | 175.41 | wind | 5.0 | 90 | > th | dose dependent | rect. | 23 | 1 |
| 374 | 177.91 | wind | 7.0 | 10 | > th | dose dependent | rect. | 21 | 13 |
| 399 | 178.13 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 411 | 178.23 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 415 | 178.28 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 417 | 178.30 | temperature | 20.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 420 | 178.31 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 425 | 178.35 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 429 | 178.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 431 | 178.38 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 432 | 178.38 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 435 | 178.38 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 436 | 178.38 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 438 | 178.38 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 443 | 178.38 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 444 | 178.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 446 | 178.38 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 451 | 178.38 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 471 | 178.39 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 523 | 178.48 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 525 | 178.50 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 570 | 178.54 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 617 | 178.83 | wind | 7.0 | 720 | > th | dose independent | rect. | 12 | 10 |
| 700 | 179.20 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 13 |
| 708 | 179.27 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 709 | 179.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 712 | 179.27 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 716 | 179.27 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 725 | 179.27 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 726 | 179.27 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 748 | 179.27 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 751 | 179.27 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 768 | 179.29 | wind | 5.0 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 773 | 179.33 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 15 |
| 785 | 179.40 | wind | 7.0 | 720 | < th | dose independent | rect. | 14 | 9 |
| 789 | 179.45 | wind | 7.0 | 10 | > th | dose independent | rect. | 21 | 13 |
| 821 | 179.74 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 844 | 179.91 | wind | 7.0 | 720 | > th | dose dependent | rect. | 13 | 2 |
| 849 | 179.93 | wind | 1.0 | 720 | > th | dose dependent | rect. | 12 | 10 |
| 877 | 180.08 | wind | 7.0 | 270 | > th | dose independent | sin | 11 | NA |
| 886 | 180.16 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 913 | 180.29 | wind | 7.0 | 270 | < th | dose independent | sin | 12 | NA |
| 937 | 180.41 | wind | 7.0 | 720 | > th | dose independent | rect. | 12 | 5 |
| 969 | 180.55 | wind | 9.0 | 720 | < th | dose dependent | rect. | 14 | 9 |
| 977 | 180.58 | wind | 7.0 | 720 | > th | dose independent | sin | 16 | NA |
| 980 | 180.61 | wind | 7.0 | 720 | > th | dose independent | rect. | 13 | 1 |
| 982 | 180.62 | wind | 3.0 | 720 | > th | dose dependent | rect. | 15 | 7 |
| 988 | 180.65 | wind | 7.0 | 720 | < th | dose independent | sin | 16 | NA |