Os03g0781600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0781600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 190.98 | 0.649 | 4.96 | 0.611 | 0.152 | -1.46 | 0.542 | -0.581 | -0.292 | 6 | 22.1 | 852 | -- | -- |
| 191.65 | 0.645 | 4.93 | 0.832 | 0.217 | -1.49 | 0.713 | -- | -0.222 | 6.44 | 22.1 | 974 | -- | -- |
| 191.67 | 0.645 | 4.96 | 0.614 | 0.16 | -1.47 | -- | -0.616 | -0.29 | 5.54 | 22.1 | 852 | -- | -- |
| 192.78 | 0.647 | 4.94 | 0.832 | 0.22 | -1.49 | -- | -- | -0.236 | 5.92 | 22.13 | 980 | -- | -- |
| 192.91 | 0.647 | 4.97 | 0.595 | -- | -1.47 | -- | -0.674 | -0.293 | -- | 22.13 | 852 | -- | -- |
| 281.35 | 0.786 | 5.05 | 0.298 | 0.363 | -- | 0.604 | -- | -0.728 | 8.62 | -- | -- | -- | -- |
| 282.51 | 0.787 | 5.05 | 0.318 | 0.36 | -- | -- | -- | -0.728 | 8.89 | -- | -- | -- | -- |
| 194.37 | 0.649 | 4.95 | 0.811 | -- | -1.46 | -- | -- | -0.242 | -- | 22.1 | 852 | -- | -- |
| 208.44 | 0.672 | 4.97 | -- | 0.19 | -1.27 | -- | -- | -0.373 | 5.82 | 22.31 | 856 | -- | -- |
| 289.91 | 0.796 | 5.06 | 0.318 | -- | -- | -- | -- | -0.725 | -- | -- | -- | -- | -- |
| 285.18 | 0.79 | 5.05 | -- | 0.361 | -- | -- | -- | -0.763 | 8.82 | -- | -- | -- | -- |
| 209.91 | 0.675 | 4.98 | -- | -- | -1.29 | -- | -- | -0.374 | -- | 22.29 | 778 | -- | -- |
| 292.58 | 0.798 | 5.06 | -- | -- | -- | -- | -- | -0.761 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 192.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 3 | 192.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 4 | 192.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 14 |
| 20 | 193.21 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 22 | 193.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 22 |
| 23 | 193.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 54 | 193.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 56 | 193.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 57 | 193.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 61 | 193.92 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 76 | 194.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 77 | 194.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 23 |
| 82 | 194.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 132 | 195.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 133 | 195.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 218 | 196.46 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 221 | 196.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 271 | 197.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 288 | 197.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 312 | 197.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 357 | 198.31 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 369 | 198.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 406 | 198.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 522 | 199.40 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 527 | 199.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 529 | 199.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 532 | 199.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 663 | 200.07 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 739 | 200.48 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 770 | 200.60 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 780 | 200.64 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 795 | 200.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 804 | 200.73 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 864 | 201.04 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |