Os03g0781300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0781300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.64 | 0.4 | 10.1 | -0.727 | 0.471 | -1.19 | 0.847 | -0.196 | 0.237 | 5.32 | 1.958 | 1574 | -- | -- |
| 72.66 | 0.397 | 10.1 | -0.743 | 0.468 | -1.15 | 0.822 | -- | 0.236 | 5.42 | 1.948 | 1573 | -- | -- |
| 74.35 | 0.402 | 10.1 | -0.747 | 0.472 | -1.14 | -- | 0.0845 | 0.239 | 5.45 | 1.935 | 1573 | -- | -- |
| 74.34 | 0.402 | 10.1 | -0.743 | 0.467 | -1.15 | -- | -- | 0.23 | 5.49 | 1.98 | 1569 | -- | -- |
| 83.11 | 0.425 | 10.1 | -0.713 | -- | -1.13 | -- | -0.257 | 0.255 | -- | 1.83 | 1503 | -- | -- |
| 84.61 | 0.431 | 10 | -0.56 | 0.463 | -- | 0.449 | -- | 0.368 | 7.83 | -- | -- | -- | -- |
| 85.13 | 0.432 | 10 | -0.546 | 0.461 | -- | -- | -- | 0.368 | 8.11 | -- | -- | -- | -- |
| 83.17 | 0.425 | 10.1 | -0.749 | -- | -1.09 | -- | -- | 0.243 | -- | 1.906 | 1503 | -- | -- |
| 87.54 | 0.436 | 10.1 | -- | 0.467 | -0.866 | -- | -- | 0.341 | 5.74 | 2.441 | 1605 | -- | -- |
| 96.81 | 0.46 | 10.1 | -0.542 | -- | -- | -- | -- | 0.374 | -- | -- | -- | -- | -- |
| 93 | 0.451 | 10 | -- | 0.458 | -- | -- | -- | 0.429 | 8.19 | -- | -- | -- | -- |
| 96.31 | 0.457 | 10.1 | -- | -- | -0.801 | -- | -- | 0.339 | -- | 2.53 | 1525 | -- | -- |
| 104.57 | 0.477 | 10 | -- | -- | -- | -- | -- | 0.434 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.92 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 15 | 67.25 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 16 | 67.35 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 18 | 67.64 | wind | 7 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 19 | 67.71 | wind | 7 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 23 | 68.08 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 24 | 68.09 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 25 | 68.16 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 26 | 68.18 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 29 | 68.24 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 45 | 68.51 | radiation | 40 | 4320 | < th | dose independent | rect. | 15 | 18 |
| 49 | 68.58 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 51 | 68.59 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 55 | 68.64 | wind | 3 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 58 | 68.66 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 68 | 68.82 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 73 | 68.86 | wind | 7 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 77 | 68.90 | radiation | 40 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 117 | 69.23 | radiation | 40 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 127 | 69.29 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 128 | 69.30 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 131 | 69.32 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 165 | 69.48 | wind | 7 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 183 | 69.55 | radiation | 40 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 213 | 69.60 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 221 | 69.63 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 233 | 69.66 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 269 | 69.73 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 7 | 16 |
| 275 | 69.74 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 287 | 69.75 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 1 | NA |
| 296 | 69.75 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 19 | 17 |
| 467 | 69.83 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 502 | 69.84 | atmosphere | 1000 | 14400 | > th | dose dependent | rect. | 11 | 10 |
| 549 | 69.86 | atmosphere | 1000 | 14400 | > th | dose dependent | sin | 18 | NA |
| 582 | 69.87 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 716 | 69.92 | atmosphere | 1005 | 14400 | > th | dose independent | sin | 20 | NA |
| 743 | 69.93 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 4 |