Os03g0781200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0781200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.61 | 0.395 | 7.93 | 2.34 | 1.94 | -0.722 | 0.178 | 3.62 | 0.948 | 19.6 | 21.3 | 1158 | -- | -- |
| 82.61 | 0.423 | 8.05 | 1.71 | 1.92 | -0.634 | 0.247 | -- | 0.811 | 19.4 | 14.96 | 19013 | -- | -- |
| 70.7 | 0.392 | 7.93 | 2.34 | 1.94 | -0.724 | -- | 3.65 | 0.95 | 19.6 | 21.3 | 1151 | -- | -- |
| 82.08 | 0.422 | 8.04 | 1.58 | 1.89 | -0.527 | -- | -- | 0.754 | 19.4 | 11.32 | 20033 | -- | -- |
| 266.87 | 0.761 | 7.88 | 2.32 | -- | -0.714 | -- | 3.38 | 0.948 | -- | 21.78 | 1357 | -- | -- |
| 86.71 | 0.437 | 8.08 | 1.17 | 1.91 | -- | 0.356 | -- | 0.56 | 19.4 | -- | -- | -- | -- |
| 87.05 | 0.437 | 8.08 | 1.16 | 1.91 | -- | -- | -- | 0.561 | 19.4 | -- | -- | -- | -- |
| 276.79 | 0.775 | 7.99 | 1.51 | -- | -0.588 | -- | -- | 0.753 | -- | 14.8 | 12901 | -- | -- |
| 102.97 | 0.473 | 8.15 | -- | 1.91 | 0.711 | -- | -- | 0.219 | 19.4 | 4.668 | 47520 | -- | -- |
| 281.8 | 0.784 | 8.03 | 1.13 | -- | -- | -- | -- | 0.53 | -- | -- | -- | -- | -- |
| 122.5 | 0.518 | 8.1 | -- | 1.9 | -- | -- | -- | 0.431 | 19.5 | -- | -- | -- | -- |
| 253.21 | 0.741 | 8.08 | -- | -- | 1.45 | -- | -- | 0.296 | -- | 24.4 | 509 | -- | -- |
| 315.44 | 0.829 | 8.06 | -- | -- | -- | -- | -- | 0.404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.85 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 10 | 70.09 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 15 | 70.15 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 71 | 70.77 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 80 | 70.81 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 19 |
| 114 | 71.09 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 12 |
| 132 | 71.16 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 10 | 13 |
| 210 | 71.44 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 212 | 71.44 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 222 | 71.47 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 12 | 10 |
| 306 | 71.74 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 373 | 71.93 | temperature | 25.0 | 1440 | < th | dose independent | sin | 18 | NA |
| 374 | 71.94 | temperature | 25.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 461 | 72.15 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 471 | 72.16 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 479 | 72.17 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 528 | 72.27 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 561 | 72.32 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 3 | 20 |
| 580 | 72.35 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 586 | 72.36 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 589 | 72.36 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 598 | 72.38 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 672 | 72.48 | humidity | 90.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 681 | 72.49 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 682 | 72.49 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 703 | 72.52 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 719 | 72.54 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 788 | 72.64 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 847 | 72.73 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 861 | 72.76 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 885 | 72.79 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 923 | 72.83 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 1 | 23 |
| 929 | 72.84 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 18 |
| 971 | 72.89 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 991 | 72.91 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 23 |
| 994 | 72.92 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 9 |