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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0779500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.8 (0.0226) R2 : 0.0486
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.23 (0.0477) R2dN8 : 0.0628 R2N8 : 0.0486
σ : 0.426
deviance : 83.46
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
79.72 0.42 2.79 -0.0928 0.191 -0.132 -0.644 1.12 0.219 10.5 10 12 -- --
81.3 0.423 2.79 -0.0719 0.213 -0.175 -0.122 -- 0.22 10.3 10 12 -- --
80.45 0.418 2.8 -0.12 0.175 -0.0308 -- 0.884 0.195 9.46 43.15 16 -- --
81.35 0.423 2.79 -0.0765 0.215 -0.18 -- -- 0.219 10.4 10 12 -- --
80.73 0.418 2.8 -0.12 -- 0.308 -- 1.36 0.221 -- 61 15 -- --
81.81 0.424 2.8 -0.0755 0.153 -- -0.166 -- 0.221 9.3 -- -- -- --
81.91 0.424 2.8 -0.0813 0.153 -- -- -- 0.221 9.42 -- -- -- --
82.13 0.422 2.8 -0.0834 -- 0.473 -- -- 0.236 -- 60 15 -- --
81.51 0.423 2.79 -- 0.217 -0.183 -- -- 0.228 10.4 10 12 -- --
83.28 0.426 2.8 -0.0823 -- -- -- -- 0.221 -- -- -- -- --
82.08 0.424 2.79 -- 0.153 -- -- -- 0.23 9.46 -- -- -- --
82.33 0.423 2.8 -- -- 0.48 -- -- 0.238 -- 60 15 -- --
83.46 0.426 2.8 -- -- -- -- -- 0.23 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.32 radiation 1.0 90 < th dose independent rect. 10 1
3 67.32 radiation 1.0 90 < th dose dependent rect. 10 1
5 67.34 radiation 1.0 10 < th dose independent rect. 7 5
7 67.34 radiation 1.0 10 < th dose dependent rect. 7 5
9 68.09 radiation 1.0 10 < th dose independent rect. 11 1
26 68.09 radiation 1.0 10 < th dose dependent rect. 11 1
89 77.12 radiation 20.0 10 < th dose independent rect. 12 1
91 77.13 radiation 30.0 10 < th dose dependent rect. 6 7
92 77.21 wind 1.0 30 < th dose independent rect. 10 1
93 77.21 temperature 25.0 30 > th dose independent rect. 10 1
94 77.21 temperature 10.0 1440 > th dose independent rect. 11 1
98 77.21 atmosphere 995.0 1440 > th dose independent rect. 11 1
101 77.21 precipitation 0.1 1440 < th dose independent rect. 11 1
102 77.21 temperature 10.0 1440 > th dose independent rect. 12 23
105 77.21 wind 1.0 30 < th dose dependent rect. 10 1
106 77.21 precipitation 0.1 1440 < th dose dependent rect. 11 1
107 77.22 temperature 25.0 30 > th dose dependent rect. 10 1
109 77.24 humidity 70.0 30 < th dose independent rect. 10 1
112 77.30 humidity 80.0 30 < th dose dependent rect. 10 1
113 77.31 radiation 40.0 10 < th dose dependent rect. 6 18
117 77.37 temperature 20.0 30 < th dose independent rect. 6 3
127 77.39 temperature 20.0 30 < th dose dependent rect. 7 1
131 77.40 radiation 20.0 30 > th dose independent rect. 10 1
135 77.42 atmosphere 1010.0 30 < th dose independent rect. 10 1
139 77.43 atmosphere 1005.0 30 > th dose dependent rect. 10 1
142 77.44 humidity 60.0 30 > th dose independent rect. 10 1
143 77.45 atmosphere 1005.0 30 > th dose independent rect. 10 1
145 77.45 radiation 1.0 30 > th dose dependent rect. 10 1
151 77.47 temperature 10.0 30 > th dose independent rect. 10 1
153 77.47 temperature 30.0 30 < th dose independent rect. 10 1
156 77.47 atmosphere 995.0 30 > th dose independent rect. 10 1
159 77.47 precipitation 0.1 30 < th dose independent rect. 10 1
160 77.47 temperature 10.0 30 > th dose independent rect. 11 23
162 77.47 precipitation 0.1 30 < th dose dependent rect. 10 1
164 77.48 wind 1.0 30 > th dose independent rect. 10 1
167 77.51 radiation 40.0 30 < th dose independent rect. 10 1
169 77.55 radiation 40.0 10 < th dose dependent rect. 10 14
172 77.58 atmosphere 1015.0 30 < th dose dependent rect. 10 1
177 77.68 wind 7.0 1440 < th dose independent rect. 23 1
178 77.72 temperature 20.0 30 > th dose dependent rect. 22 1
179 77.72 radiation 30.0 4320 < th dose dependent rect. 23 1
181 77.73 wind 3.0 30 < th dose independent rect. 22 1
182 77.73 temperature 25.0 30 > th dose independent rect. 22 1
186 77.74 temperature 10.0 1440 > th dose independent rect. 23 1
189 77.74 temperature 30.0 1440 < th dose independent rect. 23 1
193 77.74 humidity 50.0 1440 > th dose independent rect. 23 1
203 77.74 humidity 90.0 30 < th dose independent rect. 22 1
204 77.74 atmosphere 995.0 1440 > th dose independent rect. 23 1
205 77.74 radiation 1.0 1440 < th dose independent rect. 23 1
225 77.74 temperature 10.0 1440 > th dose independent rect. 24 23
229 77.74 radiation 40.0 30 < th dose dependent rect. 10 1
230 77.74 radiation 1.0 1440 < th dose dependent rect. 23 1
236 77.75 wind 9.0 30 < th dose independent rect. 23 23
238 77.76 atmosphere 1005.0 30 > th dose dependent rect. 22 1
240 77.77 wind 5.0 30 < th dose dependent rect. 22 1
242 77.78 precipitation 0.1 30 < th dose independent rect. 22 1
245 77.78 humidity 90.0 30 < th dose dependent rect. 22 1
246 77.78 atmosphere 995.0 30 > th dose dependent rect. 22 1
248 77.78 precipitation 0.1 30 < th dose dependent rect. 22 1
249 77.79 wind 1.0 30 > th dose independent rect. 22 1
253 77.79 temperature 10.0 30 > th dose independent rect. 22 1
255 77.79 temperature 30.0 30 < th dose independent rect. 22 1
256 77.79 humidity 50.0 30 > th dose independent rect. 22 1
260 77.79 atmosphere 995.0 30 > th dose independent rect. 22 1
263 77.79 atmosphere 1010.0 30 < th dose independent rect. 22 1
265 77.79 radiation 1.0 30 < th dose independent rect. 22 1
270 77.79 temperature 10.0 30 > th dose independent rect. 23 23
271 77.79 radiation 1.0 30 < th dose dependent rect. 22 1
276 77.80 humidity 50.0 30 > th dose dependent rect. 22 1
281 77.82 humidity 50.0 30 > th dose dependent rect. 10 1
283 77.82 radiation 40.0 10 < th dose dependent rect. 6 10
284 77.83 atmosphere 1015.0 30 < th dose dependent rect. 22 1
285 77.84 wind 1.0 30 > th dose dependent rect. 22 1
288 77.85 radiation 20.0 10 < th dose independent rect. 6 18
296 77.90 radiation 20.0 10 < th dose independent rect. 11 13
300 77.90 radiation 40.0 43200 < th dose dependent rect. 23 1
303 77.91 wind 1.0 30 > th dose dependent rect. 10 1
304 77.91 temperature 30.0 30 < th dose dependent rect. 22 1
358 77.98 wind 3.0 30 < th dose independent rect. 6 17
390 78.07 wind 1.0 90 > th dose independent rect. 5 18
402 78.11 radiation 1.0 90 < th dose independent rect. 23 7
403 78.11 wind 5.0 10 < th dose independent rect. 6 10
404 78.12 temperature 10.0 90 > th dose dependent rect. 23 6
409 78.14 radiation 20.0 10 < th dose independent rect. 6 7
451 78.20 radiation 40.0 10 < th dose dependent rect. 6 20
452 78.21 humidity 80.0 10 > th dose independent rect. 6 18
456 78.22 atmosphere 995.0 30 > th dose independent rect. 11 23
458 78.24 wind 9.0 30 < th dose dependent rect. 6 17
465 78.26 radiation 10.0 10 > th dose independent rect. 11 23
468 78.27 radiation 1.0 90 < th dose dependent rect. 23 7
470 78.28 precipitation 0.1 90 < th dose independent rect. 23 22
472 78.28 precipitation 0.1 90 < th dose dependent rect. 23 22
484 78.29 wind 5.0 10 < th dose independent rect. 6 6
496 78.31 humidity 50.0 10 > th dose dependent rect. 6 18
500 78.34 atmosphere 995.0 90 > th dose independent rect. 23 22
507 78.36 humidity 70.0 10 > th dose dependent rect. 6 18
514 78.38 humidity 50.0 10 > th dose dependent rect. 6 6
522 78.40 humidity 80.0 10 > th dose independent rect. 6 7
526 78.41 wind 9.0 90 < th dose independent rect. 5 18
537 78.44 radiation 1.0 90 < th dose independent rect. 23 22
538 78.44 precipitation 0.1 30 < th dose independent rect. 11 23
541 78.44 precipitation 0.1 30 < th dose dependent rect. 11 23
545 78.46 precipitation 0.1 90 < th dose independent rect. 5 18
547 78.46 precipitation 0.1 90 < th dose dependent rect. 5 18
548 78.47 wind 7.0 90 < th dose independent rect. 23 6
550 78.47 wind 7.0 90 < th dose independent rect. 21 14
553 78.48 temperature 10.0 90 > th dose independent rect. 23 6
554 78.48 temperature 30.0 90 < th dose independent rect. 23 6
555 78.48 humidity 50.0 90 > th dose independent rect. 23 6
558 78.48 atmosphere 995.0 90 > th dose independent rect. 23 6
559 78.48 radiation 20.0 90 < th dose independent rect. 23 6
562 78.48 precipitation 0.1 90 < th dose independent rect. 23 6
563 78.48 temperature 10.0 90 > th dose independent rect. 5 18
566 78.48 radiation 30.0 90 < th dose dependent rect. 23 6
568 78.48 precipitation 0.1 90 < th dose dependent rect. 23 6
574 78.49 radiation 10.0 10 < th dose independent rect. 24 6
590 78.53 radiation 30.0 10 < th dose independent rect. 6 10
591 78.53 wind 1.0 270 > th dose independent rect. 3 20
592 78.53 wind 9.0 90 < th dose dependent rect. 23 6
604 78.57 humidity 60.0 90 > th dose independent rect. 21 14
605 78.57 atmosphere 1015.0 90 < th dose independent rect. 5 18
611 78.58 atmosphere 1015.0 90 < th dose independent rect. 23 22
617 78.59 radiation 20.0 10 < th dose dependent rect. 24 6
618 78.59 radiation 1.0 90 < th dose dependent rect. 23 22
623 78.61 atmosphere 995.0 90 > th dose independent rect. 5 18
625 78.61 atmosphere 995.0 90 > th dose dependent rect. 5 6
627 78.61 humidity 70.0 10 > th dose dependent rect. 6 7
628 78.62 radiation 1.0 90 < th dose independent rect. 23 11
634 78.62 humidity 50.0 90 > th dose dependent rect. 23 6
647 78.64 wind 9.0 10 < th dose dependent rect. 6 6
660 78.66 atmosphere 995.0 10 > th dose dependent rect. 24 6
663 78.66 wind 9.0 30 < th dose dependent rect. 6 10
666 78.67 atmosphere 1015.0 90 < th dose independent rect. 23 6
668 78.67 wind 1.0 90 > th dose independent rect. 11 10
686 78.70 temperature 25.0 30 > th dose dependent rect. 22 13
691 78.71 wind 9.0 10 < th dose independent rect. 6 18
698 78.72 humidity 80.0 10 > th dose independent rect. 24 6
705 78.73 precipitation 0.1 10 < th dose independent rect. 23 23
708 78.73 precipitation 0.1 10 < th dose dependent rect. 23 23
709 78.74 humidity 50.0 90 > th dose independent rect. 5 18
715 78.75 wind 1.0 90 > th dose independent rect. 5 6
723 78.76 precipitation 0.1 10 < th dose independent rect. 6 18
727 78.76 precipitation 0.1 10 < th dose dependent rect. 6 18
728 78.77 wind 7.0 10 < th dose independent rect. 24 6
730 78.77 temperature 10.0 10 > th dose independent rect. 24 6
731 78.77 temperature 30.0 10 < th dose independent rect. 24 6
732 78.77 humidity 50.0 10 > th dose independent rect. 24 6
735 78.77 atmosphere 995.0 10 > th dose independent rect. 24 6
740 78.77 temperature 10.0 90 > th dose independent rect. 11 10
741 78.77 atmosphere 1015.0 90 < th dose independent rect. 11 10
742 78.77 temperature 10.0 90 > th dose independent rect. 21 14
743 78.77 atmosphere 995.0 90 > th dose independent rect. 21 14
744 78.77 precipitation 0.1 90 < th dose independent rect. 21 14
745 78.77 temperature 10.0 10 > th dose independent rect. 6 18
749 78.77 precipitation 0.1 90 < th dose dependent rect. 21 14
751 78.78 atmosphere 1015.0 10 < th dose independent rect. 24 6
753 78.78 radiation 40.0 10 < th dose independent rect. 10 14
760 78.79 precipitation 0.1 10 < th dose independent rect. 24 6
763 78.79 wind 1.0 10 > th dose independent rect. 6 18
768 78.79 precipitation 0.1 10 < th dose dependent rect. 24 6
770 78.80 radiation 1.0 1440 > th dose independent rect. 11 1
773 78.80 temperature 10.0 1440 > th dose independent rect. 24 7
777 78.80 temperature 30.0 1440 < th dose independent rect. 24 7
784 78.80 humidity 50.0 1440 > th dose independent rect. 24 7
790 78.80 atmosphere 995.0 1440 > th dose independent rect. 24 7
794 78.80 radiation 40.0 1440 < th dose independent rect. 24 7
801 78.80 temperature 10.0 1440 > th dose independent rect. 7 17
806 78.80 atmosphere 995.0 10 > th dose independent rect. 23 23
809 78.80 atmosphere 995.0 90 > th dose dependent rect. 23 6
824 78.82 radiation 20.0 10 < th dose independent rect. 21 16
830 78.83 precipitation 0.1 90 < th dose independent rect. 11 10
831 78.83 wind 1.0 270 > th dose independent rect. 18 14
833 78.83 precipitation 0.1 90 < th dose dependent rect. 11 10
840 78.84 radiation 1.0 90 < th dose dependent rect. 23 11
843 78.85 radiation 30.0 10 < th dose independent rect. 21 14
845 78.85 humidity 50.0 90 > th dose independent rect. 23 22
846 78.85 wind 9.0 30 < th dose independent rect. 11 23
875 78.87 humidity 80.0 90 > th dose dependent rect. 6 1
886 78.88 temperature 10.0 90 > th dose dependent rect. 5 6
898 78.89 atmosphere 995.0 90 > th dose dependent rect. 11 10
912 78.91 temperature 30.0 90 < th dose independent rect. 21 14
915 78.91 humidity 50.0 10 > th dose independent rect. 6 18
926 78.92 wind 7.0 90 < th dose independent rect. 5 6
931 78.92 atmosphere 995.0 10 > th dose independent rect. 6 18
938 78.92 humidity 50.0 10 > th dose dependent rect. 6 10
967 78.95 precipitation 0.1 270 > th dose independent rect. 8 3
975 78.95 precipitation 0.1 270 > th dose dependent rect. 8 3
982 78.96 atmosphere 995.0 90 > th dose independent rect. 11 10
988 78.96 temperature 30.0 90 < th dose dependent rect. 6 1
997 78.97 temperature 25.0 10 > th dose independent rect. 6 5
998 78.97 humidity 60.0 10 > th dose independent rect. 6 6
999 78.97 atmosphere 1000.0 90 > th dose independent rect. 5 6