Os03g0779000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os03g0779000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.14 | 0.426 | 5.77 | 0.0187 | 0.802 | 1.12 | -0.931 | -2.52 | 0.0251 | 7.05 | 20.1 | 4795 | -- | -- |
| 84.36 | 0.428 | 5.68 | 0.565 | 0.785 | 1.4 | -0.876 | -- | 0.139 | 6.99 | 12.5 | 5996 | -- | -- |
| 84.38 | 0.428 | 5.77 | 0.00748 | 0.794 | 1.12 | -- | -2.48 | 0.0269 | 7.1 | 19.91 | 4741 | -- | -- |
| 86.45 | 0.433 | 5.68 | 0.537 | 0.751 | 1.41 | -- | -- | 0.146 | 7.15 | 11.51 | 5820 | -- | -- |
| 113.92 | 0.497 | 5.79 | 0.038 | -- | 1.12 | -- | -2.14 | 0.00476 | -- | 18.72 | 5731 | -- | -- |
| 117.55 | 0.508 | 5.61 | 1.24 | 0.772 | -- | -0.954 | -- | 0.453 | 6.92 | -- | -- | -- | -- |
| 119.91 | 0.513 | 5.61 | 1.22 | 0.769 | -- | -- | -- | 0.455 | 6.96 | -- | -- | -- | -- |
| 115.92 | 0.501 | 5.7 | 0.539 | -- | 1.44 | -- | -- | 0.157 | -- | 10.16 | 5724 | -- | -- |
| 92.03 | 0.447 | 5.71 | -- | 0.766 | 1.7 | -- | -- | 0.0328 | 7.08 | 11.31 | 5974 | -- | -- |
| 150.98 | 0.574 | 5.63 | 1.24 | -- | -- | -- | -- | 0.47 | -- | -- | -- | -- | -- |
| 159.13 | 0.59 | 5.64 | -- | 0.783 | -- | -- | -- | 0.32 | 6.87 | -- | -- | -- | -- |
| 120.89 | 0.512 | 5.75 | -- | -- | 1.62 | -- | -- | -0.0904 | -- | 11.92 | 11432 | -- | -- |
| 191.26 | 0.646 | 5.66 | -- | -- | -- | -- | -- | 0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.64 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 19 |
| 2 | 81.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 19 |
| 4 | 81.74 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 17 |
| 6 | 81.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 15 |
| 9 | 81.81 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 17 |
| 51 | 82.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 55 | 82.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 21 |
| 56 | 82.66 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 19 |
| 102 | 82.89 | temperature | 20 | 4320 | > th | dose dependent | sin | 5 | NA |
| 103 | 82.90 | temperature | 25 | 4320 | > th | dose independent | sin | 5 | NA |
| 104 | 82.90 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 19 |
| 108 | 82.91 | temperature | 20 | 4320 | > th | dose dependent | rect. | 8 | 21 |
| 115 | 82.92 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 23 |
| 125 | 82.93 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 133 | 82.95 | temperature | 25 | 4320 | < th | dose independent | sin | 5 | NA |
| 135 | 82.95 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 163 | 82.98 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 191 | 83.01 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 13 |
| 197 | 83.02 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 13 |
| 212 | 83.04 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 223 | 83.05 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 224 | 83.05 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 270 | 83.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 274 | 83.13 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 10 |
| 304 | 83.16 | temperature | 25 | 4320 | > th | dose independent | rect. | 10 | 22 |
| 305 | 83.16 | temperature | 10 | 4320 | > th | dose dependent | sin | 9 | NA |
| 311 | 83.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 22 |
| 332 | 83.18 | temperature | 20 | 4320 | > th | dose dependent | sin | 15 | NA |
| 358 | 83.20 | temperature | 30 | 4320 | < th | dose dependent | sin | 9 | NA |
| 420 | 83.25 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 439 | 83.26 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 22 |
| 444 | 83.26 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 7 |
| 446 | 83.26 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 7 |
| 452 | 83.27 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 506 | 83.31 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 23 |
| 513 | 83.32 | temperature | 25 | 4320 | < th | dose independent | rect. | 10 | 19 |
| 515 | 83.32 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 547 | 83.34 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 561 | 83.35 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 683 | 83.42 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 861 | 83.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 862 | 83.53 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 958 | 83.59 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 1 |