Os03g0778400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0778400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 217.63 | 0.693 | 9.07 | 0.542 | 0.916 | 2.77 | 0.329 | 1.26 | -0.412 | 10.2 | 25.09 | 845 | -- | -- |
| 219.62 | 0.69 | 9.05 | 0.71 | 0.931 | 2.65 | 0.584 | -- | -0.391 | 10.2 | 25.46 | 841 | -- | -- |
| 217.99 | 0.688 | 9.07 | 0.525 | 0.915 | 2.79 | -- | 1.45 | -0.417 | 10.2 | 25.09 | 855 | -- | -- |
| 220.86 | 0.692 | 9.04 | 0.756 | 0.901 | 2.67 | -- | -- | -0.357 | 10.2 | 25.54 | 855 | -- | -- |
| 255.11 | 0.744 | 9.06 | 0.815 | -- | 3.28 | -- | 0.558 | -0.347 | -- | 31.22 | 829 | -- | -- |
| 322.95 | 0.842 | 9.16 | -0.00387 | 1.3 | -- | 0.486 | -- | -0.927 | 10.4 | -- | -- | -- | -- |
| 323.91 | 0.843 | 9.16 | 0.016 | 1.3 | -- | -- | -- | -0.925 | 10.5 | -- | -- | -- | -- |
| 255.26 | 0.744 | 9.06 | 0.891 | -- | 3.26 | -- | -- | -0.349 | -- | 31.47 | 828 | -- | -- |
| 234.45 | 0.713 | 9.07 | -- | 0.983 | 2.32 | -- | -- | -0.507 | 10.7 | 25.24 | 673 | -- | -- |
| 427.65 | 0.966 | 9.19 | -0.00632 | -- | -- | -- | -- | -0.93 | -- | -- | -- | -- | -- |
| 323.92 | 0.842 | 9.16 | -- | 1.3 | -- | -- | -- | -0.927 | 10.5 | -- | -- | -- | -- |
| 273.64 | 0.77 | 9.1 | -- | -- | 2.92 | -- | -- | -0.519 | -- | 32.02 | 794 | -- | -- |
| 427.65 | 0.965 | 9.19 | -- | -- | -- | -- | -- | -0.93 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 212.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 4 | 212.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 15 | 213.95 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 19 | 214.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 31 | 214.58 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 44 | 214.91 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 46 | 214.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 68 | 215.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 72 | 215.50 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 74 | 215.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 76 | 215.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 77 | 215.57 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 81 | 215.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 85 | 215.63 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 96 | 215.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 11 |
| 107 | 215.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 266 | 216.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 276 | 216.85 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 343 | 217.11 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 612 | 218.12 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 714 | 218.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 717 | 218.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 771 | 218.63 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 819 | 218.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 855 | 218.89 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 922 | 219.14 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |