Os03g0777000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NAC-domain containing protein 19 (ANAC019) (ANAC) (Abscicic-acid- responsive NAC).
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Os03g0777000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NAC-domain containing protein 19 (ANAC019) (ANAC) (Abscicic-acid- responsive NAC).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.21 | 0.466 | 10.1 | 2.14 | 0.116 | 0.552 | 1.12 | 2.62 | 0.799 | 22.8 | 1001 | 5456 | -- | -- |
| 101.74 | 0.47 | 10.1 | 2.29 | 0.0866 | 1.04 | 1.04 | -- | 0.767 | 22.6 | 999.3 | 10219 | -- | -- |
| 103.42 | 0.474 | 10.1 | 2.11 | 0.109 | 0.559 | -- | 2.59 | 0.8 | 22.2 | 1001 | 5452 | -- | -- |
| 106.6 | 0.481 | 10.1 | 2.26 | 0.11 | 1.09 | -- | -- | 0.777 | 21.7 | 999.5 | 10265 | -- | -- |
| 104.17 | 0.475 | 10.1 | 2.1 | -- | 0.543 | -- | 2.62 | 0.797 | -- | 1001 | 5500 | -- | -- |
| 124.19 | 0.522 | 10.1 | 2.1 | 0.114 | -- | 1.1 | -- | 0.869 | 22.6 | -- | -- | -- | -- |
| 129.18 | 0.532 | 10.1 | 2.06 | 0.111 | -- | -- | -- | 0.866 | 21.9 | -- | -- | -- | -- |
| 107.26 | 0.482 | 10.1 | 2.24 | -- | 1.08 | -- | -- | 0.776 | -- | 999.6 | 10265 | -- | -- |
| 232.96 | 0.711 | 10.1 | -- | 0.147 | 0.732 | -- | -- | 0.592 | 21.7 | 1002 | 6710 | -- | -- |
| 129.92 | 0.533 | 10.1 | 2.06 | -- | -- | -- | -- | 0.866 | -- | -- | -- | -- | -- |
| 240.77 | 0.726 | 10.1 | -- | 0.125 | -- | -- | -- | 0.637 | 23.2 | -- | -- | -- | -- |
| 180.17 | 0.625 | 10.2 | -- | -- | 1.27 | -- | -- | 0.458 | -- | 993.9 | 31224 | -- | -- |
| 241.75 | 0.726 | 10.1 | -- | -- | -- | -- | -- | 0.638 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.62 | wind | 5 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 2 | 95.46 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 3 | 96.26 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 7 | 98.19 | wind | 5 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 9 | 98.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 9 |
| 11 | 98.63 | wind | 5 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 12 | 98.67 | wind | 5 | 4320 | > th | dose independent | rect. | 14 | 11 |
| 15 | 98.82 | wind | 5 | 4320 | > th | dose dependent | rect. | 14 | 7 |
| 20 | 98.89 | wind | 5 | 4320 | > th | dose dependent | rect. | 14 | 11 |
| 21 | 98.92 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 24 | 98.97 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 29 | 99.02 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 30 | 99.04 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 33 | 99.06 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 43 | 99.11 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 52 | 99.14 | temperature | 25 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 72 | 99.21 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 76 | 99.22 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 8 | 3 |
| 92 | 99.28 | atmosphere | 1000 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 93 | 99.28 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 102 | 99.30 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 6 | 15 |
| 103 | 99.30 | atmosphere | 1000 | 4320 | < th | dose dependent | rect. | 9 | 5 |
| 113 | 99.33 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 127 | 99.36 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 132 | 99.37 | atmosphere | 1000 | 4320 | > th | dose independent | sin | 0 | NA |
| 133 | 99.37 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 146 | 99.39 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 152 | 99.40 | atmosphere | 1000 | 4320 | < th | dose independent | sin | 0 | NA |
| 158 | 99.41 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 173 | 99.44 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 13 | 2 |
| 204 | 99.47 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 209 | 99.48 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 221 | 99.49 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 263 | 99.53 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 15 |
| 278 | 99.55 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 282 | 99.55 | wind | 5 | 4320 | < th | dose independent | rect. | 14 | 11 |
| 432 | 99.65 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 7 |
| 447 | 99.66 | wind | 7 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 455 | 99.66 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 528 | 99.73 | atmosphere | 995 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 713 | 99.84 | wind | 7 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 776 | 99.87 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 792 | 99.88 | atmosphere | 995 | 14400 | < th | dose dependent | sin | 22 | NA |
| 832 | 99.91 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 20 | 21 |
| 859 | 99.93 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 18 |
| 931 | 99.95 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 18 | 22 |