Os03g0776400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0776400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.86 | 0.585 | 7.32 | 2.69 | 0.204 | -2.55 | 0.227 | -0.156 | 0.648 | 3.55 | 19.7 | 5696 | -- | -- |
| 154.52 | 0.579 | 7.33 | 2.65 | 0.225 | -2.56 | 0.162 | -- | 0.65 | 3.64 | 19.6 | 5818 | -- | -- |
| 154.4 | 0.579 | 7.32 | 2.67 | 0.243 | -2.61 | -- | -0.195 | 0.654 | 3.78 | 19.6 | 5940 | -- | -- |
| 154.48 | 0.579 | 7.33 | 2.64 | 0.243 | -2.57 | -- | -- | 0.644 | 3.91 | 19.59 | 5940 | -- | -- |
| 157.04 | 0.584 | 7.31 | 2.7 | -- | -2.66 | -- | -0.41 | 0.659 | -- | 19.55 | 5694 | -- | -- |
| 261.55 | 0.758 | 7.17 | 4.39 | 0.262 | -- | 0.168 | -- | 1.35 | 3.62 | -- | -- | -- | -- |
| 261.59 | 0.757 | 7.17 | 4.38 | 0.266 | -- | -- | -- | 1.35 | 4 | -- | -- | -- | -- |
| 157.23 | 0.584 | 7.33 | 2.66 | -- | -2.55 | -- | -- | 0.65 | -- | 19.56 | 5694 | -- | -- |
| 169.51 | 0.606 | 7.48 | -- | 0.216 | -4.13 | -- | -- | -0.00696 | 4.47 | 17.6 | 47520 | -- | -- |
| 265.47 | 0.761 | 7.17 | 4.4 | -- | -- | -- | -- | 1.36 | -- | -- | -- | -- | -- |
| 768.27 | 1.3 | 7.28 | -- | 0.352 | -- | -- | -- | 0.86 | 3.82 | -- | -- | -- | -- |
| 172.16 | 0.611 | 7.48 | -- | -- | -4.09 | -- | -- | -0.0257 | -- | 17.81 | 47520 | -- | -- |
| 775.09 | 1.3 | 7.28 | -- | -- | -- | -- | -- | 0.868 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 149.73 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 7 | 152.57 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 27 | 153.08 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 64 | 153.24 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 67 | 153.26 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 7 | NA |
| 114 | 153.42 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 194 | 153.55 | humidity | 70 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 212 | 153.58 | humidity | 60 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 239 | 153.62 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 254 | 153.64 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 263 | 153.65 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 264 | 153.65 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 270 | 153.66 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 271 | 153.66 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 286 | 153.69 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 2 |
| 433 | 154.05 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 10 |
| 440 | 154.07 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 468 | 154.15 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 544 | 154.50 | wind | 9 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 583 | 154.77 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 585 | 154.77 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 17 |
| 592 | 154.81 | humidity | 60 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 598 | 154.84 | wind | 9 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 603 | 154.88 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 604 | 154.88 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 606 | 154.90 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 612 | 154.94 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 616 | 154.99 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 625 | 155.04 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 633 | 155.06 | temperature | 20 | 14400 | < th | dose dependent | rect. | 1 | 9 |
| 655 | 155.22 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 662 | 155.27 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 678 | 155.38 | humidity | 60 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 694 | 155.48 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 725 | 155.71 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 731 | 155.78 | humidity | 70 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 737 | 155.81 | wind | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 747 | 155.89 | temperature | 20 | 14400 | < th | dose dependent | sin | 7 | NA |
| 756 | 155.92 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 762 | 155.95 | humidity | 60 | 43200 | < th | dose dependent | sin | 8 | NA |
| 767 | 156.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 786 | 156.13 | humidity | 90 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 800 | 156.23 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 816 | 156.32 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 818 | 156.32 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 837 | 156.40 | humidity | 70 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 839 | 156.40 | humidity | 90 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 849 | 156.46 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 853 | 156.47 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 855 | 156.47 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 862 | 156.51 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 914 | 156.80 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 917 | 156.81 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 920 | 156.81 | humidity | 50 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 927 | 156.86 | humidity | 60 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 936 | 156.90 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 943 | 156.92 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 956 | 156.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 959 | 156.96 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 16 | 14 |
| 960 | 156.96 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 23 | 20 |