Os03g0775600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0775600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.97 | 0.379 | 11.3 | -0.159 | 0.577 | 1.03 | -0.75 | -0.0897 | 0.0299 | 9.91 | 76 | 807 | -- | -- |
| 64.26 | 0.373 | 11.3 | -0.164 | 0.622 | 1.02 | -0.911 | -- | 0.0559 | 9.15 | 74.64 | 905 | -- | -- |
| 66.58 | 0.38 | 11.3 | -0.148 | 0.571 | 1.06 | -- | -0.636 | 0.0468 | 9.84 | 75.99 | 828 | -- | -- |
| 67.14 | 0.382 | 11.3 | -0.196 | 0.625 | 1.01 | -- | -- | 0.0541 | 9.3 | 74.29 | 899 | -- | -- |
| 77.81 | 0.411 | 11.3 | -0.0778 | -- | 1.55 | -- | -0.81 | 0.0667 | -- | 75.96 | 821 | -- | -- |
| 84.37 | 0.431 | 11.3 | -0.276 | 1.11 | -- | -0.809 | -- | -0.0162 | 9.32 | -- | -- | -- | -- |
| 86.73 | 0.436 | 11.3 | -0.306 | 1.11 | -- | -- | -- | -0.017 | 9.35 | -- | -- | -- | -- |
| 78.73 | 0.413 | 11.3 | -0.152 | -- | 1.55 | -- | -- | 0.0757 | -- | 74.99 | 829 | -- | -- |
| 68.14 | 0.384 | 11.3 | -- | 0.612 | 1.04 | -- | -- | 0.0773 | 9.32 | 74.31 | 899 | -- | -- |
| 159.07 | 0.589 | 11.3 | -0.311 | -- | -- | -- | -- | -0.0126 | -- | -- | -- | -- | -- |
| 89.19 | 0.442 | 11.3 | -- | 1.11 | -- | -- | -- | 0.017 | 9.37 | -- | -- | -- | -- |
| 79.31 | 0.415 | 11.3 | -- | -- | 1.56 | -- | -- | 0.0872 | -- | 74.99 | 829 | -- | -- |
| 161.62 | 0.593 | 11.3 | -- | -- | -- | -- | -- | 0.0219 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.04 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 2 | 63.07 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 7 | 63.37 | humidity | 70 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 11 | 63.57 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 15 |
| 15 | 63.78 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 31 | 64.17 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 39 | 64.24 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 47 | 64.30 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 49 | 64.39 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 78 | 64.73 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 22 |
| 85 | 64.77 | humidity | 80 | 720 | > th | dose independent | rect. | 2 | 20 |
| 121 | 65.02 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 142 | 65.12 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 149 | 65.16 | humidity | 90 | 1440 | < th | dose dependent | rect. | 6 | 7 |
| 167 | 65.24 | humidity | 70 | 720 | > th | dose dependent | rect. | 2 | 19 |
| 170 | 65.26 | humidity | 70 | 1440 | > th | dose dependent | sin | 1 | NA |
| 328 | 65.87 | humidity | 90 | 1440 | < th | dose dependent | sin | 3 | NA |
| 360 | 65.98 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 412 | 66.12 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 448 | 66.22 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 484 | 66.30 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 535 | 66.39 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 540 | 66.40 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 543 | 66.41 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 15 |
| 552 | 66.44 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 22 |
| 634 | 66.59 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 20 |
| 657 | 66.64 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 666 | 66.65 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 673 | 66.66 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 727 | 66.78 | humidity | 90 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 935 | 67.11 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 949 | 67.13 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 973 | 67.16 | humidity | 60 | 14400 | < th | dose dependent | sin | 11 | NA |
| 978 | 67.17 | humidity | 80 | 1440 | < th | dose dependent | sin | 8 | NA |
| 986 | 67.18 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 21 |