Os03g0775200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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Os03g0775200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF248, methyltransferase putative family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.89 | 0.567 | 7.22 | -0.705 | 0.353 | -1.09 | -0.814 | -1.37 | -0.094 | 10.8 | 29.7 | 1265 | -- | -- |
| 146.61 | 0.564 | 7.25 | -0.932 | 0.356 | -1.25 | -0.964 | -- | -0.088 | 11.2 | 29.8 | 1284 | -- | -- |
| 148 | 0.567 | 7.22 | -0.696 | 0.391 | -1.09 | -- | -1.62 | -0.0927 | 9.73 | 29.7 | 1234 | -- | -- |
| 148.54 | 0.568 | 7.26 | -1.05 | 0.378 | -1.25 | -- | -- | -0.141 | 9.75 | 29.7 | 1263 | -- | -- |
| 155.85 | 0.581 | 7.23 | -0.688 | -- | -1.02 | -- | -1.56 | -0.0938 | -- | 29.7 | 1335 | -- | -- |
| 222.62 | 0.699 | 7.29 | -0.607 | 0.0649 | -- | 1.57 | -- | -0.225 | 2.77 | -- | -- | -- | -- |
| 226.04 | 0.704 | 7.28 | -0.646 | 0.316 | -- | -- | -- | -0.238 | 7.56 | -- | -- | -- | -- |
| 156.22 | 0.582 | 7.27 | -1.05 | -- | -1.19 | -- | -- | -0.141 | -- | 29.8 | 1351 | -- | -- |
| 175.52 | 0.617 | 7.24 | -- | 0.382 | -1.1 | -- | -- | -0.0438 | 9.64 | 29.78 | 1234 | -- | -- |
| 231.4 | 0.711 | 7.29 | -0.642 | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
| 237.05 | 0.72 | 7.27 | -- | 0.311 | -- | -- | -- | -0.166 | 7.7 | -- | -- | -- | -- |
| 180.09 | 0.625 | 7.25 | -- | -- | -1.04 | -- | -- | -0.0231 | -- | 30.4 | 5799 | -- | -- |
| 242.26 | 0.727 | 7.27 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 3 | 149.14 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 5 | 149.22 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 7 | 149.23 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 11 | 149.23 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 16 | 149.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 23 | 149.50 | temperature | 30 | 1440 | < th | dose independent | sin | 19 | NA |
| 27 | 149.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 41 | 149.55 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 44 | 149.56 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 91 | 149.59 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 94 | 149.60 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 141 | 149.69 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 165 | 149.88 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 167 | 149.89 | temperature | 30 | 1440 | > th | dose independent | sin | 18 | NA |
| 201 | 149.97 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 217 | 150.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 220 | 150.03 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 7 |
| 224 | 150.04 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 233 | 150.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 234 | 150.09 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 271 | 150.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 18 |
| 470 | 150.55 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 472 | 150.57 | temperature | 30 | 1440 | > th | dose dependent | rect. | 10 | 6 |
| 499 | 150.70 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 500 | 150.70 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 22 |
| 506 | 150.76 | temperature | 30 | 1440 | > th | dose dependent | sin | 1 | NA |
| 632 | 150.99 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 788 | 151.09 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 885 | 151.68 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 893 | 151.77 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 923 | 152.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 993 | 152.45 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 999 | 152.57 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 4 |