Os03g0774900 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0774900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	2.91	(0.02)	R²	:	0.0193
β₁	:	--	(--)	R²_dD	:	--	R²_D	:	--
β₂	:	--	(--)	R²_dC	:	--	R²_C	:	--
β₃	:	--	(--)	R²_dE	:	--	R²_E	:	--
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	0.126	(0.0422)	R²_dN8	:	0.0249	R²_N8	:	0.0193
σ	:	0.378
deviance	:	65.44
__

_____

C
peak time of C	:	--
E
wheather	:	--
threshold	:	--
memory length	:	--
response mode	:	--
dose dependency	:	--
G
type of G	:	--
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
62.85	0.372	3.7	1.61	0.129	81.8	0.085	173	0.122	7.09	14.92	1234	--	--
64.33	0.376	2.91	-0.11	0.115	-0.105	0.215	--	0.113	7.3	14.92	1234	--	--
62.82	0.369	3.64	1.5	0.126	81.8	--	173	0.12	6.94	14.86	1233	--	--
64.34	0.374	2.91	-0.0893	0.122	0.238	--	--	0.115	6.97	14.9	1251	--	--
63.67	0.372	3.59	1.39	--	82.6	--	174	0.125	--	14.81	1230	--	--
64.35	0.376	2.91	-0.106	0.116	--	0.208	--	0.114	7.3	--	--	--	--
64.46	0.376	2.91	-0.102	0.117	--	--	--	0.113	6.96	--	--	--	--
64.88	0.375	2.9	-0.0533	--	0.156	--	--	0.144	--	24.1	1418	--	--
64.19	0.373	2.9	--	0.116	0.191	--	--	0.157	6.84	24.4	1403	--	--
65.18	0.377	2.91	-0.0996	--	--	--	--	0.115	--	--	--	--	--
64.73	0.376	2.9	--	0.116	--	--	--	0.124	7.02	--	--	--	--
63.86	0.372	2.91	--	--	0.246	--	--	0.135	--	15.8	16311	--	--
65.44	0.378	2.91	--	--	--	--	--	0.126	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	59.38	temperature	20.0	10	< th	dose dependent	rect.	15	5
11	59.56	radiation	1.0	90	< th	dose independent	rect.	14	1
12	59.56	radiation	1.0	90	< th	dose dependent	rect.	14	1
14	59.58	temperature	20.0	90	< th	dose dependent	rect.	12	4
16	59.60	temperature	20.0	10	< th	dose dependent	rect.	12	5
18	59.65	temperature	20.0	10	< th	dose independent	rect.	15	6
24	59.68	temperature	20.0	10	< th	dose independent	rect.	15	1
32	59.68	temperature	20.0	10	< th	dose dependent	rect.	15	1
93	60.14	temperature	20.0	90	< th	dose independent	rect.	12	4
236	61.48	temperature	15.0	30	> th	dose independent	rect.	3	23
237	61.48	temperature	20.0	30	> th	dose dependent	rect.	2	1
240	61.49	temperature	20.0	30	> th	dose independent	rect.	2	1
241	61.49	humidity	80.0	30	> th	dose independent	rect.	2	1
244	61.49	wind	3.0	30	< th	dose dependent	rect.	2	1
245	61.49	temperature	10.0	30	> th	dose dependent	rect.	2	1
247	61.49	humidity	70.0	30	> th	dose dependent	rect.	2	1
249	61.49	atmosphere	1005.0	30	> th	dose dependent	rect.	2	1
252	61.50	wind	3.0	30	< th	dose independent	rect.	2	1
255	61.50	atmosphere	1005.0	30	> th	dose independent	rect.	2	1
259	61.50	humidity	50.0	30	> th	dose dependent	rect.	2	1
261	61.50	atmosphere	995.0	30	> th	dose dependent	rect.	2	1
268	61.51	temperature	10.0	30	> th	dose independent	rect.	2	1
270	61.51	temperature	30.0	30	< th	dose independent	rect.	2	1
271	61.51	humidity	50.0	30	> th	dose independent	rect.	2	1
274	61.51	atmosphere	995.0	30	> th	dose independent	rect.	2	1
276	61.51	atmosphere	1010.0	30	< th	dose independent	rect.	2	1
278	61.51	radiation	1.0	30	< th	dose independent	rect.	2	1
283	61.51	precipitation	0.1	30	< th	dose independent	rect.	2	1
287	61.51	radiation	1.0	30	< th	dose dependent	rect.	2	1
292	61.51	precipitation	0.1	30	< th	dose dependent	rect.	2	1
300	61.53	atmosphere	1015.0	30	< th	dose dependent	rect.	2	1
310	61.55	temperature	30.0	30	< th	dose dependent	rect.	2	1
312	61.56	wind	1.0	30	> th	dose independent	rect.	2	1
314	61.56	humidity	80.0	10	> th	dose independent	rect.	10	1
320	61.56	humidity	80.0	10	> th	dose dependent	rect.	10	1
330	61.58	wind	9.0	30	< th	dose independent	rect.	3	23
378	61.62	atmosphere	1005.0	30	> th	dose dependent	rect.	15	1
457	61.85	humidity	80.0	10	> th	dose dependent	rect.	16	1
483	61.91	humidity	80.0	10	> th	dose independent	rect.	14	2
485	61.92	humidity	80.0	90	> th	dose independent	rect.	14	1
503	61.94	humidity	80.0	10	> th	dose dependent	rect.	15	5
518	61.97	atmosphere	995.0	30	> th	dose independent	rect.	3	23
519	61.97	precipitation	0.1	30	< th	dose independent	rect.	3	23
522	61.97	precipitation	0.1	30	< th	dose dependent	rect.	3	23
578	62.08	atmosphere	1005.0	30	> th	dose independent	rect.	15	1
611	62.15	temperature	20.0	90	< th	dose independent	rect.	18	1
612	62.15	temperature	20.0	10	< th	dose independent	rect.	19	1
625	62.15	wind	3.0	14400	< th	dose dependent	rect.	21	1
627	62.15	temperature	20.0	90	< th	dose dependent	rect.	18	1
628	62.15	temperature	20.0	10	< th	dose dependent	rect.	19	1
651	62.17	atmosphere	1005.0	90	< th	dose dependent	rect.	8	1
662	62.18	radiation	10.0	1440	< th	dose independent	rect.	23	7
665	62.19	radiation	10.0	1440	< th	dose independent	rect.	3	3
669	62.20	radiation	1.0	14400	< th	dose independent	rect.	13	1
672	62.20	radiation	1.0	14400	< th	dose dependent	rect.	13	1
681	62.21	humidity	90.0	90	> th	dose independent	rect.	18	1
682	62.21	radiation	1.0	14400	> th	dose independent	rect.	13	1
683	62.21	radiation	1.0	10	< th	dose independent	rect.	16	1
692	62.22	temperature	20.0	270	< th	dose independent	rect.	12	1
697	62.23	radiation	10.0	1440	< th	dose independent	rect.	5	1
699	62.23	humidity	90.0	90	> th	dose dependent	rect.	18	1
717	62.26	atmosphere	1005.0	10	> th	dose dependent	rect.	1	8
721	62.27	radiation	10.0	1440	< th	dose independent	rect.	18	12
724	62.27	temperature	10.0	10	> th	dose dependent	rect.	10	16
730	62.28	temperature	10.0	30	> th	dose dependent	rect.	3	23
735	62.30	temperature	15.0	14400	< th	dose independent	rect.	6	1
738	62.30	temperature	15.0	14400	> th	dose independent	rect.	10	10
748	62.31	atmosphere	1005.0	90	> th	dose dependent	rect.	1	5
749	62.31	wind	3.0	10	< th	dose dependent	rect.	5	22
750	62.32	wind	3.0	14400	< th	dose independent	rect.	21	1
754	62.32	temperature	15.0	14400	< th	dose independent	rect.	10	10
759	62.32	radiation	1.0	43200	< th	dose dependent	rect.	3	1
768	62.33	temperature	15.0	14400	> th	dose independent	rect.	11	5
770	62.33	temperature	15.0	14400	< th	dose independent	rect.	18	5
772	62.33	temperature	15.0	14400	> th	dose independent	rect.	11	7
780	62.33	temperature	20.0	720	< th	dose dependent	rect.	9	3
781	62.33	radiation	1.0	10	< th	dose dependent	rect.	6	11
786	62.34	temperature	15.0	14400	> th	dose independent	rect.	12	2
788	62.34	temperature	15.0	14400	< th	dose independent	rect.	11	7
803	62.35	temperature	15.0	14400	> th	dose independent	rect.	18	5
815	62.35	temperature	15.0	14400	< th	dose independent	rect.	6	14
841	62.36	humidity	50.0	30	> th	dose independent	rect.	3	23
846	62.37	temperature	15.0	14400	< th	dose independent	sin	21	NA
870	62.38	wind	9.0	1440	< th	dose independent	rect.	3	1
871	62.38	temperature	10.0	1440	> th	dose independent	rect.	3	1
874	62.38	temperature	30.0	1440	< th	dose independent	rect.	3	1
878	62.38	temperature	20.0	720	< th	dose independent	rect.	10	1
880	62.38	humidity	50.0	1440	> th	dose independent	rect.	3	1
889	62.38	humidity	90.0	720	> th	dose independent	rect.	11	1
890	62.38	atmosphere	995.0	1440	> th	dose independent	rect.	3	1
891	62.38	radiation	1.0	1440	< th	dose independent	rect.	3	1
911	62.38	precipitation	0.1	720	> th	dose independent	rect.	10	1
916	62.38	humidity	80.0	30	> th	dose independent	rect.	14	6
931	62.38	temperature	10.0	1440	> th	dose independent	rect.	4	23
934	62.38	temperature	20.0	720	> th	dose dependent	rect.	10	1
937	62.38	humidity	90.0	720	> th	dose dependent	rect.	11	1
938	62.38	radiation	1.0	1440	< th	dose dependent	rect.	3	1
953	62.38	precipitation	0.1	720	> th	dose dependent	rect.	10	1
960	62.39	humidity	50.0	43200	> th	dose independent	rect.	19	1
976	62.39	temperature	15.0	14400	< th	dose dependent	rect.	21	1
979	62.39	temperature	15.0	14400	< th	dose dependent	rect.	17	6
985	62.39	temperature	15.0	14400	< th	dose dependent	rect.	5	15
999	62.40	temperature	15.0	14400	< th	dose dependent	sin	21	NA