Os03g0774800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os03g0774800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 233.93 | 0.719 | 4.03 | -0.549 | 1.07 | -0.443 | 0.927 | 6.52 | -0.476 | 9.99 | 18.21 | 3798 | -- | -- |
| 270.32 | 0.772 | 4.28 | -2.3 | 1.19 | -0.697 | 0.583 | -- | -0.939 | 10.6 | 10.08 | 23442 | -- | -- |
| 237.18 | 0.717 | 4.03 | -0.524 | 1.08 | -0.457 | -- | 6.41 | -0.472 | 9.98 | 18.25 | 3894 | -- | -- |
| 268.59 | 0.763 | 4.26 | -2.07 | 1.08 | -0.685 | -- | -- | -0.853 | 9.93 | 6.68 | 7122 | -- | -- |
| 304.62 | 0.813 | 4.06 | -0.479 | -- | -0.696 | -- | 6.27 | -0.441 | -- | 18.3 | 3726 | -- | -- |
| 274.92 | 0.777 | 4.3 | -2.44 | 1.1 | -- | 0.609 | -- | -1.04 | 10 | -- | -- | -- | -- |
| 276.36 | 0.778 | 4.3 | -2.41 | 1.09 | -- | -- | -- | -1.04 | 10 | -- | -- | -- | -- |
| 333.94 | 0.851 | 4.39 | -3.18 | -- | 0.752 | -- | -- | -1.29 | -- | 32.5 | 47520 | -- | -- |
| 309.36 | 0.819 | 4.12 | -- | 1.05 | -1.77 | -- | -- | -0.234 | 9.93 | 6.431 | 45944 | -- | -- |
| 348.18 | 0.872 | 4.33 | -2.43 | -- | -- | -- | -- | -1.04 | -- | -- | -- | -- | -- |
| 429.84 | 0.97 | 4.24 | -- | 1.1 | -- | -- | -- | -0.766 | 10.2 | -- | -- | -- | -- |
| 376.82 | 0.904 | 4.14 | -- | -- | -1.81 | -- | -- | -0.216 | -- | 6.266 | 46924 | -- | -- |
| 503.54 | 1.05 | 4.27 | -- | -- | -- | -- | -- | -0.767 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 217.18 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 2 | 217.54 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 3 | 218.14 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 4 | 218.36 | temperature | 20 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 5 | 218.82 | temperature | 20 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 20 | 219.87 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 8 |
| 24 | 219.92 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 8 |
| 68 | 220.55 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 88 | 220.87 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 15 |
| 104 | 221.11 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 135 | 221.50 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 141 | 221.60 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 149 | 221.75 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 157 | 221.86 | temperature | 20 | 43200 | > th | dose independent | sin | 11 | NA |
| 163 | 221.94 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 167 | 221.96 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 176 | 222.09 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 191 | 222.22 | temperature | 20 | 43200 | < th | dose independent | sin | 11 | NA |
| 218 | 222.59 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 220 | 222.62 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 229 | 222.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 257 | 223.01 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 17 |
| 259 | 223.02 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 265 | 223.09 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 275 | 223.17 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 292 | 223.32 | temperature | 15 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 318 | 223.56 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 348 | 223.76 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 395 | 224.08 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 397 | 224.10 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 424 | 224.21 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 428 | 224.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 430 | 224.24 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 503 | 224.51 | temperature | 30 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 515 | 224.56 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 523 | 224.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 527 | 224.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 538 | 224.64 | temperature | 15 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 540 | 224.65 | temperature | 25 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 574 | 224.75 | temperature | 15 | 43200 | > th | dose dependent | sin | 13 | NA |
| 610 | 224.85 | humidity | 80 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 614 | 224.86 | temperature | 15 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 635 | 224.91 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 642 | 224.92 | temperature | 15 | 43200 | > th | dose dependent | rect. | 24 | 5 |
| 650 | 224.93 | humidity | 80 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 664 | 224.97 | temperature | 25 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 809 | 225.23 | humidity | 80 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 828 | 225.26 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 832 | 225.27 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 863 | 225.32 | wind | 1 | 43200 | < th | dose independent | rect. | 14 | 12 |