Os03g0773700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Receptor-like protein kinase 2.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0773700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Receptor-like protein kinase 2.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 582.74 | 1.13 | 8.91 | -6.04 | 1.51 | 2.91 | -2.86 | -0.215 | -1.43 | 15.3 | 25 | 5411 | -- | -- |
| 582.78 | 1.12 | 8.91 | -6 | 1.51 | 2.9 | -2.87 | -- | -1.43 | 15.3 | 25 | 5414 | -- | -- |
| 607.64 | 1.15 | 8.91 | -5.98 | 1.53 | 2.86 | -- | 0.221 | -1.42 | 15.7 | 25.29 | 5487 | -- | -- |
| 607.64 | 1.15 | 8.91 | -6.03 | 1.53 | 2.87 | -- | -- | -1.43 | 15.7 | 25.3 | 5487 | -- | -- |
| 711.98 | 1.24 | 8.92 | -5.85 | -- | 2.55 | -- | 0.605 | -1.61 | -- | 25.3 | 6274 | -- | -- |
| 866.57 | 1.38 | 8.85 | -4.93 | 1.29 | -- | -3.26 | -- | -1.19 | 15.5 | -- | -- | -- | -- |
| 896.76 | 1.4 | 8.87 | -4.99 | 1.31 | -- | -- | -- | -1.21 | 16.2 | -- | -- | -- | -- |
| 711.14 | 1.24 | 8.96 | -6.07 | -- | 2.6 | -- | -- | -1.67 | -- | 25.3 | 6248 | -- | -- |
| 1460.55 | 1.78 | 8.77 | -- | 1.45 | 1.43 | -- | -- | -0.641 | 16.1 | 28 | 5534 | -- | -- |
| 989.7 | 1.47 | 8.86 | -5.04 | -- | -- | -- | -- | -1.25 | -- | -- | -- | -- | -- |
| 1553.17 | 1.84 | 8.74 | -- | 1.41 | -- | -- | -- | -0.656 | 16.1 | -- | -- | -- | -- |
| 1573.3 | 1.85 | 8.74 | -- | -- | 1.41 | -- | -- | -0.713 | -- | 28.19 | 6331 | -- | -- |
| 1660.64 | 1.9 | 8.74 | -- | -- | -- | -- | -- | -0.687 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 518.39 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 2 | 518.52 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 8 | 519.61 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 19 | 8 |
| 12 | 519.81 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 30 | 521.71 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 34 | 521.93 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 83 | 524.57 | temperature | 25.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 89 | 524.82 | temperature | 25.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 123 | 527.10 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 129 | 527.23 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 16 |
| 137 | 527.80 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 10 | NA |
| 166 | 528.74 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 173 | 528.90 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 181 | 529.14 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 241 | 530.74 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 249 | 531.03 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 262 | 531.45 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 265 | 531.45 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 267 | 531.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 341 | 533.51 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 354 | 533.69 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 360 | 533.85 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 383 | 534.34 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 392 | 534.53 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 486 | 536.68 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 488 | 536.73 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 495 | 536.79 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 508 | 536.94 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 542 | 537.39 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 552 | 537.46 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 580 | 537.90 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 583 | 537.92 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 587 | 537.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 9 |
| 612 | 538.11 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 633 | 538.43 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 665 | 538.94 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 21 |
| 718 | 539.53 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 777 | 540.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 783 | 540.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 784 | 540.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 5 |
| 793 | 540.27 | temperature | 30.0 | 14400 | < th | dose independent | sin | 2 | NA |
| 874 | 540.89 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 890 | 541.12 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 14 |
| 906 | 541.15 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 12 |
| 909 | 541.15 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 915 | 541.19 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 18 |
| 916 | 541.19 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 20 |
| 924 | 541.26 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 23 |
| 946 | 541.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 950 | 541.43 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 20 |
| 952 | 541.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 955 | 541.44 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 957 | 541.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 5 |
| 961 | 541.45 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 16 |