Os03g0772900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0772900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.18 | 0.511 | 2.83 | -0.0301 | 0.0786 | -0.289 | 0.852 | 9.02 | -0.0442 | 6.03 | 0.7802 | 178 | 20.9 | 1.02 |
| 118.24 | 0.506 | 2.87 | -0.0478 | 0.0744 | 3.39 | 0.823 | -- | -0.0455 | 5.98 | 0.6415 | 177 | 21 | 0.117 |
| 119.69 | 0.51 | 2.83 | -0.00914 | 0.0923 | -0.737 | -- | 10 | -0.0505 | 4.18 | 0.746 | 177 | 20.9 | 1.08 |
| 119.76 | 0.51 | 2.87 | -0.0467 | 0.0804 | 3.41 | -- | -- | -0.0473 | 4.01 | 0.6512 | 177 | 21 | 0.1 |
| 120.2 | 0.511 | 2.83 | -0.0119 | -- | -0.569 | -- | 9.56 | -0.0465 | -- | 0.7277 | 177 | 20.9 | 1.1 |
| 140.28 | 0.555 | 2.85 | 0.0493 | 0.115 | -- | 0.681 | -- | -0.0539 | 3.66 | -- | -- | -- | -- |
| 141.51 | 0.557 | 2.86 | 0.0383 | 0.126 | -- | -- | -- | -0.0576 | 1.97 | -- | -- | -- | -- |
| 120.28 | 0.511 | 2.87 | -0.0467 | -- | 3.41 | -- | -- | -0.0473 | -- | 0.6512 | 177 | 21 | 0.1 |
| 119.85 | 0.51 | 2.87 | -- | 0.0819 | 3.4 | -- | -- | -0.0478 | 3.62 | 0.644 | 177 | 21 | 0.104 |
| 142.47 | 0.558 | 2.86 | 0.0435 | -- | -- | -- | -- | -0.0547 | -- | -- | -- | -- | -- |
| 141.55 | 0.557 | 2.86 | -- | 0.126 | -- | -- | -- | -0.0619 | 1.98 | -- | -- | -- | -- |
| 120.36 | 0.511 | 2.87 | -- | -- | 3.35 | -- | -- | -0.0495 | -- | 0.6485 | 177 | 21 | 0.1 |
| 142.51 | 0.557 | 2.86 | -- | -- | -- | -- | -- | -0.0595 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.29 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 1 |
| 3 | 126.86 | wind | 1.0 | 270 | < th | dose dependent | rect. | 15 | 7 |
| 9 | 127.48 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 1 |
| 10 | 127.60 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 18 | 1 |
| 13 | 128.28 | temperature | 25.0 | 10 | < th | dose independent | rect. | 18 | 2 |
| 19 | 128.48 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 18 | 2 |
| 31 | 128.69 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 19 | 2 |
| 51 | 129.04 | wind | 1.0 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 69 | 129.58 | wind | 3.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 71 | 129.61 | wind | 7.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 76 | 129.88 | wind | 5.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 81 | 130.18 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 91 | 130.42 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 94 | 130.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 1 |
| 95 | 130.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 102 | 130.53 | wind | 1.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 113 | 130.58 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 20 | 23 |
| 116 | 130.58 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 118 | 130.60 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 121 | 130.60 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 123 | 130.60 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 1 |
| 126 | 130.60 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 131 | 130.60 | temperature | 10.0 | 90 | > th | dose independent | rect. | 20 | 23 |
| 132 | 130.60 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 138 | 130.63 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 20 | 23 |
| 193 | 130.84 | wind | 1.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 194 | 130.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 197 | 130.84 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 201 | 130.84 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 207 | 130.84 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 211 | 130.84 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 234 | 130.84 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 237 | 130.84 | wind | 1.0 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 238 | 130.84 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 319 | 131.03 | wind | 9.0 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 359 | 131.14 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 23 |
| 422 | 131.23 | temperature | 30.0 | 30 | < th | dose independent | rect. | 21 | 22 |
| 442 | 131.32 | wind | 1.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 443 | 131.32 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 19 | 5 |
| 469 | 131.45 | wind | 1.0 | 90 | < th | dose independent | rect. | 16 | 6 |
| 479 | 131.47 | wind | 1.0 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 497 | 131.51 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 562 | 132.03 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 568 | 132.06 | wind | 1.0 | 90 | > th | dose independent | rect. | 20 | 23 |
| 609 | 132.17 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 628 | 132.21 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 633 | 132.23 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 636 | 132.25 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 641 | 132.28 | humidity | 50.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 667 | 132.38 | wind | 1.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 771 | 132.52 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 19 | 1 |
| 831 | 132.60 | wind | 1.0 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 838 | 132.67 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 851 | 132.72 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 21 | 22 |
| 862 | 132.77 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 13 |
| 865 | 132.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 10 |
| 876 | 132.84 | humidity | 50.0 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 897 | 132.93 | wind | 5.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 930 | 133.05 | radiation | 10.0 | 90 | < th | dose independent | rect. | 20 | 11 |
| 934 | 133.07 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 1 |
| 955 | 133.18 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 11 |
| 956 | 133.18 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 13 |
| 967 | 133.24 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 20 | 13 |
| 971 | 133.25 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 20 | 11 |
| 973 | 133.26 | radiation | 10.0 | 90 | < th | dose independent | rect. | 20 | 13 |
| 981 | 133.30 | wind | 1.0 | 30 | < th | dose independent | rect. | 11 | 1 |