Os03g0772300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0772300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.55 | 0.31 | 10.2 | -0.746 | 0.371 | 0.0835 | 0.5 | 1.1 | 0.121 | 23.2 | 1015 | 4631 | -- | -- |
| 47.91 | 0.322 | 10.2 | -0.964 | 0.386 | 0.148 | 0.368 | -- | 0.0452 | 23.3 | 1014 | 21292 | -- | -- |
| 44.61 | 0.311 | 10.2 | -0.771 | 0.368 | 0.0758 | -- | 1.11 | 0.118 | 23.2 | 1015 | 4521 | -- | -- |
| 47.59 | 0.321 | 10.3 | -1.38 | 0.36 | 0.434 | -- | -- | -0.0604 | 23.2 | 1014 | 47520 | -- | -- |
| 53.08 | 0.339 | 10.2 | -0.759 | -- | 0.0778 | -- | 1.07 | 0.122 | -- | 1014 | 4673 | -- | -- |
| 49.5 | 0.33 | 10.2 | -0.963 | 0.367 | -- | 0.464 | -- | 0.0939 | 23.2 | -- | -- | -- | -- |
| 50.42 | 0.333 | 10.2 | -0.982 | 0.365 | -- | -- | -- | 0.0922 | 23.2 | -- | -- | -- | -- |
| 55.46 | 0.347 | 10.3 | -1.43 | -- | 0.473 | -- | -- | -0.0774 | -- | 1013 | 47520 | -- | -- |
| 68.59 | 0.386 | 10.2 | -- | 0.367 | -0.432 | -- | -- | 0.319 | 23.2 | 1010 | 47520 | -- | -- |
| 58.74 | 0.358 | 10.2 | -0.973 | -- | -- | -- | -- | 0.0955 | -- | -- | -- | -- | -- |
| 75.82 | 0.407 | 10.2 | -- | 0.356 | -- | -- | -- | 0.202 | 23.1 | -- | -- | -- | -- |
| 72.9 | 0.398 | 10.2 | -- | -- | -0.519 | -- | -- | 0.328 | -- | 1016 | 47520 | -- | -- |
| 83.7 | 0.427 | 10.2 | -- | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.67 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 2 | 42.92 | wind | 1.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 3 | 43.05 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 4 | 43.06 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 5 | 43.14 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 8 | 43.18 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 9 | 43.20 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 10 | 43.20 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 11 | 43.20 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 28 | 43.49 | wind | 5.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 34 | 43.54 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 20 | 16 |
| 35 | 43.54 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 39 | 43.57 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 21 | 15 |
| 60 | 43.61 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 66 | 43.62 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 68 | 43.62 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 8 |
| 69 | 43.62 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 12 |
| 79 | 43.63 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 84 | 43.63 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 87 | 43.64 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 92 | 43.64 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 8 |
| 115 | 43.65 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 3 | 2 |
| 116 | 43.65 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 1 | 10 |
| 119 | 43.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 121 | 43.66 | wind | 7.0 | 1440 | > th | dose independent | rect. | 23 | 10 |
| 131 | 43.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 144 | 43.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 152 | 43.68 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 193 | 43.70 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 207 | 43.72 | wind | 7.0 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 249 | 43.74 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 264 | 43.76 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 8 |
| 293 | 43.78 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 313 | 43.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 317 | 43.79 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 359 | 43.81 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 12 |
| 372 | 43.81 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 393 | 43.83 | atmosphere | 1015.0 | 4320 | < th | dose independent | no | NA | NA |
| 411 | 43.83 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 4 | 23 |
| 434 | 43.84 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 439 | 43.84 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 463 | 43.85 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 23 |
| 470 | 43.86 | temperature | 20.0 | 4320 | < th | dose independent | sin | 13 | NA |
| 472 | 43.86 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 478 | 43.86 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 5 | 7 |
| 479 | 43.86 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 5 | 7 |
| 521 | 43.87 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 525 | 43.88 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 545 | 43.88 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 548 | 43.88 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 554 | 43.89 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 574 | 43.89 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 575 | 43.89 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 579 | 43.90 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 617 | 43.91 | temperature | 20.0 | 4320 | > th | dose independent | sin | 13 | NA |
| 619 | 43.91 | atmosphere | 1015.0 | 4320 | > th | dose independent | no | NA | NA |
| 646 | 43.91 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 674 | 43.92 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 1 | 23 |
| 730 | 43.94 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 23 |
| 787 | 43.97 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 5 | 3 |
| 812 | 43.98 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 814 | 43.98 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 818 | 43.98 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 896 | 44.01 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 943 | 44.02 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |