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Os03g0766600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.27 (0.0575) R2 : 0.675
β1 : 1.5 (0.211) R2dD : 0.0377 R2D : 0.00584
β2 : 3.81 (0.156) R2dC : 0.499 R2C : 0.0851
β3 : -4.52 (0.185) R2dE : 0.502 R2E : 0.117
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -3.58 (0.798) R2dD*E : 0.0148 R2D*E : 0.0125
γ1 : 0.841 (0.123) R2dN8 : 0.0439 R2N8 : 0.00948
σ : 1.08
deviance : 533.74
__
_____
C
peak time of C : 15.3
E
wheather : temperature
threshold : 9.832
memory length : 255
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.32
open length of G : 5.74

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
529.3 1.08 8.28 1.46 3.82 -4.52 1.39 -4.4 0.813 15.2 8.678 263 5.27 5.77
558.16 1.1 8.29 1.51 3.73 -4.48 0.591 -- 0.799 15.3 11.2 225 5.5 5.83
533.74 1.08 8.27 1.5 3.81 -4.52 -- -3.58 0.841 15.3 9.832 255 5.32 5.74
555.56 1.1 8.27 1.55 3.82 -4.59 -- -- 0.835 15.3 10.44 245 5.5 5.65
944.8 1.43 8.3 1.53 -- -2.89 -- -2.06 0.729 -- -42.43 175 2.23 8.76
804.26 1.33 8.37 1.38 3.79 -- 2.83 -- 0.745 18.5 -- -- -- --
823.34 1.34 8.36 1.34 3.81 -- -- -- 0.756 18.4 -- -- -- --
914.75 1.41 8.25 1.46 -- -3.34 -- -- 0.861 -- 1.878 219 0.64 9.7
618.71 1.16 8.31 -- 3.84 -4.51 -- -- 0.703 15.3 10.3 236 5.58 5.7
1578.24 1.86 8.29 1.24 -- -- -- -- 0.675 -- -- -- -- --
870.79 1.38 8.39 -- 3.79 -- -- -- 0.606 18.4 -- -- -- --
940.2 1.43 8.26 -- -- -3.48 -- -- 0.762 -- 4.996 114 0.5 10.9
1619.05 1.88 8.32 -- -- -- -- -- 0.537 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 532.81 temperature 10.0 270 > th dose dependent rect. 5 6
3 540.69 temperature 10.0 270 > th dose dependent rect. 7 3
15 566.18 radiation 1.0 270 > th dose independent rect. 18 17
19 568.36 temperature 15.0 10 > th dose dependent rect. 7 5
26 569.51 temperature 20.0 270 > th dose independent rect. 6 5
28 571.05 radiation 1.0 270 > th dose independent rect. 4 7
48 574.20 wind 5.0 270 < th dose independent rect. 6 5
50 574.47 wind 9.0 270 < th dose dependent rect. 6 5
55 575.91 wind 5.0 270 < th dose independent rect. 7 3
68 580.74 precipitation 0.1 270 < th dose independent rect. 5 6
69 580.74 precipitation 0.1 270 < th dose dependent rect. 5 6
74 581.60 radiation 1.0 270 > th dose independent rect. 7 3
78 582.11 atmosphere 995.0 270 > th dose independent rect. 5 6
79 582.11 atmosphere 1015.0 270 < th dose independent rect. 5 6
80 582.11 temperature 10.0 270 > th dose independent rect. 11 18
81 582.32 humidity 50.0 270 > th dose independent rect. 5 6
83 582.49 wind 9.0 270 < th dose dependent rect. 7 3
95 583.41 wind 7.0 270 < th dose independent rect. 17 18
106 584.68 wind 7.0 270 < th dose independent rect. 18 16
112 586.32 precipitation 0.1 270 < th dose independent rect. 7 3
113 586.32 precipitation 0.1 270 < th dose dependent rect. 7 3
116 586.58 humidity 50.0 270 > th dose independent rect. 7 3
118 586.85 wind 9.0 270 < th dose independent rect. 11 18
122 587.16 atmosphere 995.0 270 > th dose independent rect. 7 3
123 587.16 atmosphere 1015.0 270 < th dose independent rect. 7 3
124 587.16 temperature 10.0 270 > th dose independent rect. 10 21
144 590.54 atmosphere 995.0 270 > th dose independent rect. 11 19
145 591.68 precipitation 0.1 270 < th dose independent rect. 18 16
146 591.68 precipitation 0.1 270 < th dose dependent rect. 18 16
151 592.66 humidity 50.0 270 > th dose dependent rect. 22 8
154 592.82 precipitation 0.1 270 < th dose independent rect. 17 18
155 592.82 precipitation 0.1 270 < th dose dependent rect. 17 18
168 593.28 wind 9.0 270 < th dose independent rect. 10 21
180 594.66 radiation 1.0 270 > th dose independent sin 8 NA
186 595.68 humidity 50.0 270 > th dose independent rect. 18 16
194 595.86 temperature 10.0 270 > th dose independent rect. 10 8
195 595.86 atmosphere 1015.0 270 < th dose independent rect. 10 8
196 595.86 temperature 10.0 270 > th dose independent rect. 18 16
209 596.90 precipitation 0.1 270 < th dose independent rect. 6 16
211 596.90 precipitation 0.1 270 < th dose dependent rect. 6 16
212 597.20 wind 1.0 270 > th dose independent rect. 7 3
223 599.06 temperature 15.0 270 > th dose independent rect. 6 16
227 599.78 atmosphere 995.0 270 > th dose independent rect. 18 16
233 600.54 radiation 10.0 270 < th dose dependent sin 9 NA
234 600.72 wind 9.0 270 < th dose independent rect. 6 16
236 600.80 temperature 10.0 270 > th dose independent rect. 11 6
237 600.80 atmosphere 1015.0 270 < th dose independent rect. 11 6
238 600.80 temperature 10.0 270 > th dose independent rect. 17 18
239 600.87 radiation 10.0 270 < th dose dependent rect. 22 9
240 601.41 temperature 15.0 270 > th dose independent rect. 22 8
247 601.78 precipitation 0.1 270 < th dose independent rect. 11 19
248 601.78 precipitation 0.1 270 < th dose dependent rect. 11 19
250 601.87 temperature 10.0 10 > th dose dependent rect. 8 16
253 602.13 wind 9.0 270 < th dose independent rect. 10 8
261 602.54 radiation 1.0 270 < th dose independent sin 8 NA
266 603.10 precipitation 0.1 270 < th dose independent rect. 11 6
267 603.10 precipitation 0.1 270 < th dose dependent rect. 11 6
268 603.12 precipitation 0.1 270 < th dose independent rect. 10 8
269 603.12 precipitation 0.1 270 < th dose dependent rect. 10 8
271 603.25 radiation 10.0 270 < th dose independent rect. 22 9
274 603.59 temperature 30.0 270 < th dose independent rect. 22 8
275 603.59 humidity 50.0 270 > th dose independent rect. 22 8
278 603.59 atmosphere 995.0 270 > th dose independent rect. 22 8
284 603.85 radiation 40.0 270 < th dose dependent rect. 22 8
285 603.87 wind 9.0 270 < th dose independent rect. 22 8
287 604.09 temperature 20.0 10 > th dose independent rect. 8 4
288 604.14 atmosphere 995.0 270 > th dose independent rect. 11 6
289 604.30 temperature 10.0 90 > th dose dependent rect. 8 16
298 605.20 temperature 30.0 270 < th dose independent rect. 7 2
300 605.26 wind 9.0 270 < th dose independent rect. 11 6
306 605.62 humidity 90.0 90 < th dose independent rect. 7 5
312 605.83 atmosphere 995.0 270 > th dose independent rect. 10 8
330 606.83 humidity 50.0 270 > th dose independent rect. 17 18
341 607.71 radiation 40.0 270 < th dose independent rect. 7 2
354 607.95 radiation 1.0 270 < th dose dependent sin 7 NA
360 608.11 wind 7.0 10 < th dose independent rect. 20 16
368 609.01 humidity 90.0 10 < th dose independent rect. 8 4
369 609.19 wind 1.0 270 > th dose independent rect. 10 8
374 609.51 humidity 90.0 90 < th dose independent rect. 20 16
381 609.85 atmosphere 1000.0 10 > th dose independent rect. 12 20
387 610.25 atmosphere 995.0 270 > th dose independent rect. 17 18
388 610.28 wind 1.0 270 > th dose independent rect. 11 6
389 610.37 wind 1.0 270 > th dose independent rect. 6 5
409 611.39 precipitation 0.1 270 < th dose independent rect. 22 8
410 611.39 precipitation 0.1 270 < th dose dependent rect. 22 8
415 611.67 humidity 50.0 270 > th dose independent rect. 11 19
418 611.72 humidity 90.0 90 < th dose independent rect. 17 19
420 611.83 radiation 1.0 270 < th dose independent rect. 22 20
429 612.25 radiation 1.0 270 < th dose independent rect. 22 16
434 612.42 radiation 40.0 10 < th dose independent rect. 12 20
435 612.43 wind 7.0 10 < th dose independent rect. 8 4
465 613.56 atmosphere 1015.0 270 < th dose independent rect. 6 16
469 613.74 temperature 15.0 10 > th dose independent rect. 12 20
504 614.59 radiation 10.0 270 < th dose dependent rect. 22 15
506 614.62 humidity 50.0 270 > th dose independent rect. 11 6
520 615.07 radiation 1.0 10 > th dose independent rect. 8 4
532 615.82 temperature 10.0 10 > th dose independent rect. 8 4
534 615.82 atmosphere 995.0 10 > th dose independent rect. 8 4
535 615.82 atmosphere 1015.0 10 < th dose independent rect. 8 4
536 615.82 precipitation 0.1 10 < th dose independent rect. 8 4
538 615.82 precipitation 0.1 10 < th dose dependent rect. 8 4
540 615.88 temperature 10.0 270 > th dose dependent rect. 22 8
557 616.29 radiation 1.0 270 > th dose independent rect. 11 6
567 616.69 atmosphere 1015.0 270 < th dose dependent rect. 7 3
584 617.57 radiation 1.0 270 > th dose dependent rect. 17 17
591 617.91 wind 9.0 10 < th dose independent rect. 12 20
593 617.93 wind 9.0 270 < th dose independent rect. 15 10
603 618.23 temperature 10.0 90 > th dose dependent rect. 20 16
612 618.42 radiation 1.0 270 < th dose dependent rect. 22 20
619 618.83 radiation 1.0 90 > th dose dependent rect. 17 19
640 619.27 temperature 30.0 270 < th dose independent rect. 6 4
643 619.44 humidity 50.0 270 > th dose independent rect. 12 17
659 620.01 temperature 10.0 270 > th dose independent rect. 15 10
660 620.01 temperature 10.0 270 > th dose independent rect. 1 14
661 620.01 atmosphere 1015.0 270 < th dose independent rect. 1 14
675 620.33 radiation 1.0 90 > th dose dependent sin 7 NA
678 620.40 precipitation 0.1 10 < th dose independent rect. 20 16
679 620.40 precipitation 0.1 10 < th dose dependent rect. 20 16
686 620.59 radiation 40.0 270 < th dose independent rect. 15 10
689 620.64 humidity 90.0 90 < th dose dependent rect. 20 15
690 620.66 radiation 1.0 90 > th dose dependent rect. 7 5
696 620.82 wind 1.0 10 > th dose independent rect. 8 4
702 620.93 atmosphere 1015.0 270 < th dose independent rect. 11 19
713 621.21 atmosphere 995.0 270 > th dose independent rect. 1 14
715 621.31 atmosphere 1010.0 270 < th dose independent rect. 22 8
734 621.44 radiation 1.0 90 > th dose dependent rect. 4 8
762 621.54 wind 1.0 270 > th dose independent rect. 17 17
814 622.47 precipitation 0.1 270 < th dose independent rect. 16 9
815 622.47 precipitation 0.1 270 < th dose dependent rect. 16 9
873 623.67 radiation 40.0 90 < th dose dependent sin 7 NA
888 623.78 temperature 10.0 10 > th dose independent rect. 12 8
890 623.78 atmosphere 1015.0 10 < th dose independent rect. 12 8
891 623.78 temperature 10.0 10 > th dose independent rect. 20 16
892 623.78 atmosphere 995.0 10 > th dose independent rect. 20 16
927 624.77 atmosphere 1015.0 10 < th dose dependent rect. 8 4
939 625.05 atmosphere 1015.0 270 < th dose dependent rect. 6 5