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Os03g0765900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : PetM of cytochrome b6f complex subunit 7 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 16.7 (0.0224) R2 : 0.476
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.883 (0.0539) R2dC : 0.309 R2C : 0.257
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.572 (0.0472) R2dN8 : 0.218 R2N8 : 0.166
σ : 0.423
deviance : 81.68
__
_____
C
peak time of C : 22.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
69.48 0.392 16.7 -0.424 0.896 -0.211 1.19 -0.93 -0.619 22.5 20.1 317 -- --
71.78 0.395 16.7 -0.273 0.914 -0.125 1.18 -- -0.569 22.7 22.01 793 -- --
72.71 0.4 16.7 -0.546 0.852 -0.116 -- -0.942 -0.637 22.5 21 52 -- --
77.56 0.41 16.7 -0.308 0.912 -0.128 -- -- -0.564 22.6 22 740 -- --
112.01 0.493 16.7 -0.512 -- -0.314 -- -1.09 -0.578 -- 22.1 47 -- --
72.43 0.399 16.7 -0.314 0.889 -- 1.18 -- -0.609 22.8 -- -- -- --
78.25 0.414 16.7 -0.361 0.885 -- -- -- -0.612 22.6 -- -- -- --
115.24 0.5 16.7 -0.259 -- -0.346 -- -- -0.512 -- 26.48 11 -- --
79.85 0.416 16.7 -- 0.925 -0.21 -- -- -0.516 22.6 21.6 856 -- --
126.53 0.526 16.7 -0.345 -- -- -- -- -0.608 -- -- -- -- --
81.68 0.423 16.7 -- 0.883 -- -- -- -0.572 22.6 -- -- -- --
116.36 0.502 16.7 -- -- -0.369 -- -- -0.484 -- 26.31 11 -- --
129.66 0.531 16.7 -- -- -- -- -- -0.569 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.87 temperature 10.0 10 > th dose dependent rect. 6 18
3 65.62 radiation 10.0 14400 < th dose dependent rect. 22 3
4 65.64 temperature 20.0 270 > th dose independent rect. 4 19
7 65.89 temperature 20.0 270 > th dose independent rect. 3 21
8 65.89 atmosphere 995.0 10 > th dose dependent rect. 24 6
11 65.92 radiation 10.0 14400 < th dose dependent rect. 20 5
12 65.96 temperature 30.0 720 > th dose independent rect. 13 1
15 66.07 atmosphere 1005.0 30 > th dose dependent rect. 14 7
16 66.09 temperature 15.0 270 > th dose dependent rect. 17 7
18 66.18 atmosphere 1000.0 10 > th dose independent rect. 24 6
21 66.31 temperature 20.0 270 > th dose dependent rect. 18 5
23 66.36 temperature 20.0 270 > th dose dependent rect. 19 3
24 66.36 temperature 10.0 10 > th dose dependent rect. 6 20
31 66.50 temperature 20.0 10 > th dose independent rect. 6 18
40 66.67 precipitation 0.1 10 < th dose independent rect. 6 18
41 66.67 precipitation 0.1 10 < th dose dependent rect. 6 18
42 66.68 wind 9.0 10 < th dose dependent rect. 6 18
43 66.70 precipitation 0.1 10 < th dose independent rect. 24 6
44 66.70 precipitation 0.1 10 < th dose dependent rect. 24 6
46 66.71 temperature 20.0 10 > th dose dependent rect. 16 11
49 66.73 atmosphere 1010.0 10 < th dose independent rect. 24 6
51 66.74 wind 7.0 10 < th dose independent rect. 24 6
56 66.76 temperature 10.0 10 > th dose independent rect. 24 6
58 66.76 temperature 30.0 10 < th dose independent rect. 24 6
59 66.76 humidity 50.0 10 > th dose independent rect. 24 6
63 66.76 radiation 20.0 10 < th dose independent rect. 24 6
73 66.80 wind 9.0 10 < th dose dependent rect. 24 6
97 66.85 wind 9.0 10 < th dose independent rect. 6 18
98 66.85 temperature 30.0 10 < th dose dependent rect. 24 6
99 66.87 wind 9.0 14400 < th dose independent rect. 10 1
101 66.88 radiation 40.0 10 < th dose dependent rect. 24 6
103 66.89 temperature 10.0 1440 > th dose independent rect. 1 6
106 66.89 temperature 30.0 1440 < th dose independent rect. 1 6
110 66.89 humidity 50.0 1440 > th dose independent rect. 1 6
116 66.89 atmosphere 995.0 1440 > th dose independent rect. 1 6
117 66.89 radiation 30.0 1440 < th dose independent rect. 1 6
122 66.89 temperature 10.0 1440 > th dose independent rect. 7 18
127 66.92 atmosphere 1005.0 10 > th dose dependent rect. 16 5
140 66.96 temperature 25.0 90 > th dose independent rect. 3 4
146 67.00 wind 5.0 10 < th dose independent rect. 6 18
148 67.01 precipitation 0.1 14400 < th dose independent rect. 4 1
149 67.01 precipitation 0.1 14400 < th dose dependent rect. 4 1
158 67.06 wind 9.0 14400 > th dose independent rect. 10 1
162 67.08 temperature 15.0 30 > th dose dependent rect. 21 3
170 67.11 radiation 10.0 14400 < th dose dependent rect. 20 7
173 67.13 wind 9.0 1440 < th dose independent rect. 1 6
176 67.14 atmosphere 1005.0 30 > th dose independent rect. 14 7
178 67.15 humidity 90.0 14400 > th dose dependent rect. 7 1
179 67.15 precipitation 0.1 14400 > th dose dependent rect. 3 2
188 67.18 atmosphere 1015.0 1440 < th dose independent rect. 1 6
189 67.18 humidity 80.0 4320 < th dose dependent rect. 3 1
192 67.19 temperature 20.0 10 > th dose independent rect. 6 20
199 67.21 precipitation 0.1 14400 > th dose independent rect. 3 2
201 67.21 radiation 10.0 14400 < th dose dependent rect. 22 5
208 67.23 atmosphere 995.0 10 > th dose dependent rect. 14 16
210 67.24 temperature 20.0 10 > th dose dependent rect. 20 6
217 67.29 humidity 80.0 4320 < th dose independent rect. 3 1
222 67.30 temperature 20.0 270 > th dose dependent rect. 21 1
228 67.33 humidity 80.0 4320 > th dose independent rect. 3 1
229 67.33 temperature 20.0 270 > th dose independent rect. 17 6
232 67.34 atmosphere 1005.0 30 > th dose independent rect. 14 16
242 67.37 precipitation 0.1 4320 < th dose independent rect. 23 6
243 67.37 atmosphere 1000.0 10 > th dose independent rect. 16 14
246 67.37 precipitation 0.1 4320 < th dose dependent rect. 23 6
258 67.39 temperature 30.0 10 < th dose dependent rect. 24 10
264 67.41 precipitation 0.1 4320 > th dose independent rect. 23 6
274 67.42 precipitation 0.1 14400 > th dose dependent rect. 23 18
275 67.43 temperature 25.0 30 < th dose independent rect. 2 4
278 67.43 precipitation 0.1 14400 > th dose dependent rect. 2 15
281 67.44 atmosphere 1015.0 10 < th dose independent rect. 6 18
285 67.45 precipitation 0.1 4320 > th dose dependent rect. 23 5
294 67.46 atmosphere 995.0 10 > th dose dependent rect. 16 14
299 67.48 precipitation 0.1 14400 < th dose independent rect. 19 1
302 67.48 precipitation 0.1 14400 < th dose dependent rect. 19 1
309 67.50 precipitation 0.1 4320 < th dose independent rect. 23 11
313 67.50 wind 3.0 43200 < th dose dependent rect. 23 8
314 67.50 precipitation 0.1 4320 < th dose dependent rect. 23 11
315 67.51 precipitation 0.1 14400 > th dose independent rect. 19 1
319 67.51 temperature 25.0 90 < th dose independent rect. 1 10
320 67.51 precipitation 0.1 4320 > th dose independent rect. 23 11
332 67.53 radiation 40.0 720 > th dose independent rect. 13 1
341 67.53 temperature 30.0 10 < th dose dependent rect. 24 17
356 67.55 wind 1.0 270 > th dose independent rect. 24 3
363 67.56 precipitation 0.1 14400 > th dose dependent rect. 19 1
378 67.58 atmosphere 995.0 10 > th dose independent rect. 6 18
383 67.58 temperature 25.0 30 > th dose dependent rect. 16 14
388 67.59 wind 7.0 14400 > th dose dependent rect. 10 1
390 67.59 humidity 50.0 10 > th dose dependent rect. 24 6
395 67.59 temperature 30.0 10 < th dose dependent rect. 24 21
406 67.60 temperature 30.0 10 < th dose dependent rect. 24 19
417 67.61 precipitation 0.1 14400 > th dose dependent rect. 2 12
422 67.62 wind 1.0 270 > th dose independent rect. 13 14
428 67.63 wind 3.0 43200 < th dose dependent rect. 4 3
437 67.64 precipitation 0.1 14400 < th dose independent rect. 2 15
441 67.64 temperature 10.0 270 > th dose dependent rect. 19 13
442 67.64 precipitation 0.1 14400 < th dose dependent rect. 2 15
447 67.65 radiation 10.0 30 < th dose dependent rect. 24 11
451 67.66 temperature 25.0 270 < th dose independent rect. 1 2
455 67.66 precipitation 0.1 4320 > th dose independent rect. 2 8
456 67.66 precipitation 0.1 14400 > th dose independent rect. 2 15
464 67.66 precipitation 0.1 4320 > th dose dependent rect. 23 11
466 67.66 radiation 10.0 30 < th dose dependent rect. 24 17
470 67.67 precipitation 0.1 14400 > th dose independent rect. 23 18
471 67.67 precipitation 0.1 14400 < th dose independent rect. 23 18
478 67.67 precipitation 0.1 14400 < th dose dependent rect. 23 18
519 67.71 wind 9.0 14400 < th dose independent rect. 6 5
533 67.71 precipitation 0.1 14400 > th dose dependent rect. 23 15
540 67.72 temperature 30.0 270 < th dose dependent rect. 24 3
547 67.72 radiation 10.0 30 < th dose dependent rect. 24 14
548 67.72 temperature 30.0 10 < th dose dependent rect. 24 15
574 67.74 temperature 30.0 10 < th dose dependent rect. 13 17
592 67.76 wind 5.0 30 < th dose independent rect. 21 3
660 67.80 radiation 20.0 30 < th dose independent rect. 12 18
669 67.81 humidity 80.0 14400 > th dose dependent rect. 13 2
672 67.81 temperature 30.0 270 < th dose dependent rect. 23 6
685 67.82 precipitation 0.1 30 < th dose independent rect. 24 21
696 67.82 temperature 20.0 10 > th dose dependent rect. 18 9
700 67.82 precipitation 0.1 30 < th dose dependent rect. 24 21
701 67.83 atmosphere 1000.0 270 > th dose independent rect. 24 3
704 67.83 wind 1.0 270 > th dose independent rect. 23 5
734 67.85 atmosphere 995.0 270 > th dose independent rect. 13 14
752 67.86 temperature 20.0 10 > th dose independent rect. 6 10
755 67.86 temperature 25.0 270 < th dose independent rect. 15 13
764 67.86 temperature 30.0 270 < th dose dependent rect. 13 15
771 67.87 atmosphere 995.0 30 > th dose independent rect. 24 21
781 67.88 temperature 10.0 1440 > th dose independent rect. 22 3
784 67.88 temperature 30.0 1440 < th dose independent rect. 22 3
788 67.88 humidity 50.0 1440 > th dose independent rect. 22 3
796 67.88 atmosphere 995.0 1440 > th dose independent rect. 22 3
797 67.88 radiation 1.0 1440 < th dose independent rect. 22 3
821 67.88 temperature 25.0 10 > th dose independent rect. 16 12
823 67.88 temperature 10.0 1440 > th dose independent rect. 1 21
837 67.89 atmosphere 1005.0 10 > th dose independent rect. 6 8
838 67.89 temperature 25.0 90 > th dose independent rect. 16 11
870 67.91 temperature 10.0 10 > th dose dependent rect. 6 10
876 67.92 precipitation 0.1 30 < th dose independent rect. 21 3
881 67.92 precipitation 0.1 30 < th dose dependent rect. 21 3
889 67.93 temperature 10.0 30 > th dose independent rect. 21 3
890 67.93 temperature 30.0 30 < th dose independent rect. 21 3
891 67.93 humidity 50.0 30 > th dose independent rect. 21 3
894 67.93 atmosphere 995.0 30 > th dose independent rect. 21 3
895 67.93 radiation 1.0 30 < th dose independent rect. 21 3
906 67.93 temperature 10.0 30 > th dose independent rect. 24 21
908 67.93 atmosphere 1015.0 30 < th dose independent rect. 24 21
910 67.93 radiation 1.0 30 < th dose dependent rect. 21 3
942 67.95 atmosphere 995.0 270 > th dose dependent rect. 24 3
953 67.96 humidity 90.0 14400 > th dose independent rect. 6 3
971 67.97 temperature 10.0 30 > th dose dependent rect. 24 6
986 67.98 wind 9.0 30 < th dose independent rect. 24 21
991 67.98 temperature 10.0 10 > th dose dependent rect. 6 8