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Os03g0765800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0134) R2 : 0.65
β1 : 1.4 (0.0518) R2dD : 0.665 R2D : 0.224
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.16 (0.0607) R2dE : 0.35 R2E : -0.0983
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.401 (0.0302) R2dN8 : 0.208 R2N8 : -0.0964
σ : 0.247
deviance : 28.23
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C
peak time of C : --
E
wheather : temperature
threshold : 13.43
memory length : 1149
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.74 0.238 10.3 1.62 0.258 -1.36 0.203 1.18 0.465 19.6 14.8 734 -- --
26.6 0.24 10.3 1.38 0.203 -1.3 0.4 -- 0.402 20.9 10.66 824 -- --
25.83 0.237 10.3 1.64 0.24 -1.36 -- 1.31 0.469 19.8 14.13 761 -- --
27.2 0.243 10.3 1.4 0.233 -1.33 -- -- 0.406 19.9 10.1 778 -- --
26.86 0.241 10.3 1.67 -- -1.18 -- 1.27 0.472 -- 12.97 1138 -- --
49.87 0.331 10.3 1.07 0.101 -- -0.318 -- 0.2 11.8 -- -- -- --
50.31 0.332 10.3 1.05 0.103 -- -- -- 0.199 12.1 -- -- -- --
28.23 0.247 10.3 1.4 -- -1.16 -- -- 0.401 -- 13.43 1149 -- --
71.96 0.397 10.3 -- 0.31 -0.843 -- -- 0.182 13.5 -5.72 648 -- --
50.97 0.334 10.3 1.05 -- -- -- -- 0.197 -- -- -- -- --
79.56 0.417 10.4 -- 0.0903 -- -- -- 0.0812 11.4 -- -- -- --
72.96 0.398 10.3 -- -- -0.632 -- -- 0.161 -- 11.46 842 -- --
80.07 0.418 10.4 -- -- -- -- -- 0.0805 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.51 temperature 10 720 > th dose dependent rect. 23 21
2 24.55 temperature 10 720 > th dose dependent rect. 16 19
3 24.65 temperature 15 720 > th dose dependent rect. 16 21
53 25.52 temperature 30 720 < th dose dependent rect. 19 20
67 25.68 temperature 10 720 > th dose dependent rect. 6 23
73 25.76 temperature 15 720 > th dose dependent no NA NA
100 25.99 temperature 10 720 > th dose dependent rect. 8 23
128 26.19 temperature 30 720 < th dose dependent rect. 1 22
141 26.25 temperature 15 720 > th dose dependent rect. 3 23
143 26.27 temperature 30 1440 < th dose dependent rect. 17 2
152 26.33 temperature 30 720 < th dose dependent rect. 13 23
167 26.44 temperature 15 720 > th dose dependent rect. 10 23
169 26.46 temperature 30 720 < th dose dependent no NA NA
260 26.72 temperature 15 1440 > th dose dependent rect. 6 20
286 26.73 wind 9 43200 > th dose dependent rect. 17 13
413 26.80 temperature 15 1440 > th dose dependent sin 16 NA
486 26.85 temperature 10 1440 > th dose dependent rect. 17 4
504 26.86 temperature 30 720 < th dose dependent rect. 9 23
560 26.91 temperature 10 1440 > th dose dependent rect. 18 1
564 26.91 temperature 15 1440 > th dose dependent rect. 13 13
580 26.92 wind 9 43200 > th dose dependent rect. 17 8
626 26.96 temperature 30 1440 < th dose dependent sin 17 NA
641 26.97 temperature 15 1440 > th dose dependent rect. 16 8
644 26.97 temperature 30 1440 < th dose dependent rect. 4 18
773 27.05 temperature 10 1440 > th dose dependent sin 2 NA
775 27.05 temperature 10 720 > th dose dependent rect. 23 14
827 27.08 wind 9 43200 > th dose dependent rect. 19 5
916 27.12 wind 9 43200 > th dose dependent rect. 19 9