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Os03g0765400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.49 (0.055) R2 : 0.902
β1 : 0.581 (0.201) R2dD : 0.00176 R2D : -0.00276
β2 : 13.1 (0.209) R2dC : 1.8 R2C : 0.329
β3 : 6.38 (0.181) R2dE : 0.558 R2E : -0.914
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -4.03 (0.546) R2dD*E : 0.013 R2D*E : 0.0109
γ1 : 0.747 (0.117) R2dN8 : 0.0111 R2N8 : -0.00679
σ : 1.03
deviance : 486.13
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_____
C
peak time of C : 18.3
E
wheather : radiation
threshold : 2.493
memory length : 305
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 21.2
open length of G : 17.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
487.44 1.04 9.48 0.569 12.9 6.14 0.66 -3.8 0.736 18.4 2.464 299 21.2 17.7
514.11 1.06 9.48 0.702 13.2 6.47 3.65 -- 0.756 18.3 2.449 312 21 18.1
486.13 1.03 9.49 0.581 13.1 6.38 -- -4.03 0.747 18.3 2.493 305 21.2 17.8
548.75 1.09 9.47 0.677 13.2 6.42 -- -- 0.78 18.3 2.486 312 21 17.8
4627.52 3.19 9.22 0.368 -- 1.72 -- -2.12 0.499 -- 3.176 4405 20.6 19.1
831.36 1.35 9.44 0.465 8.66 -- 1.48 -- 0.621 20.1 -- -- -- --
837.96 1.36 9.44 0.421 8.65 -- -- -- 0.621 20.2 -- -- -- --
3592.19 2.8 9.21 0.32 -- 3.54 -- -- 0.579 -- 2.676 4445 17.9 19.8
559.84 1.1 9.47 -- 13.2 6.41 -- -- 0.725 18.3 2.476 314 21 17.8
4959.08 3.29 9.22 0.351 -- -- -- -- 0.519 -- -- -- -- --
842.64 1.36 9.45 -- 8.65 -- -- -- 0.574 20.2 -- -- -- --
2735.84 2.44 9.24 -- -- -5.2 -- -- 0.435 -- 123.4 5470 0.987 15.1
4962.33 3.29 9.23 -- -- -- -- -- 0.48 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 513.63 radiation 1.0 270 < th dose independent rect. 22 17
10 526.57 radiation 1.0 270 < th dose dependent rect. 22 17
12 527.90 radiation 1.0 270 > th dose independent rect. 17 18
14 531.05 radiation 10.0 270 < th dose dependent rect. 21 10
26 537.84 radiation 1.0 270 > th dose independent rect. 4 7
46 542.18 precipitation 0.1 270 < th dose independent rect. 3 9
47 542.18 precipitation 0.1 270 < th dose dependent rect. 3 9
48 542.33 temperature 15.0 270 > th dose independent rect. 4 8
62 544.47 humidity 90.0 90 < th dose independent rect. 6 6
74 547.66 precipitation 0.1 270 < th dose independent rect. 17 17
75 547.66 precipitation 0.1 270 < th dose dependent rect. 17 17
76 547.81 radiation 20.0 10 < th dose dependent sin 5 NA
84 550.33 precipitation 0.1 270 < th dose independent rect. 4 7
85 550.33 precipitation 0.1 270 < th dose dependent rect. 4 7
86 550.37 humidity 70.0 90 > th dose dependent rect. 23 18
92 551.66 temperature 15.0 270 > th dose independent rect. 6 16
98 552.95 humidity 90.0 10 < th dose dependent rect. 20 16
145 556.40 humidity 60.0 90 > th dose dependent rect. 23 10
147 556.78 wind 9.0 270 < th dose independent rect. 4 7
149 556.79 atmosphere 995.0 270 > th dose independent rect. 4 7
150 556.79 atmosphere 1015.0 270 < th dose independent rect. 4 7
151 556.79 temperature 10.0 270 > th dose independent rect. 11 17
152 557.24 precipitation 0.1 270 < th dose independent rect. 6 15
154 557.24 precipitation 0.1 270 < th dose dependent rect. 6 15
155 557.33 humidity 80.0 10 < th dose independent rect. 4 8
160 557.73 humidity 80.0 10 < th dose independent rect. 22 14
161 557.95 humidity 80.0 10 < th dose independent rect. 2 10
165 558.21 radiation 1.0 270 > th dose independent sin 9 NA
177 558.87 wind 9.0 270 < th dose independent rect. 12 16
179 558.93 radiation 10.0 10 > th dose independent rect. 6 6
193 559.06 temperature 10.0 270 > th dose independent rect. 21 9
194 559.06 temperature 30.0 270 < th dose independent rect. 21 9
195 559.06 humidity 50.0 270 > th dose independent rect. 21 9
198 559.06 atmosphere 995.0 270 > th dose independent rect. 21 9
199 559.06 radiation 20.0 270 < th dose independent rect. 21 9
203 559.17 radiation 1.0 270 < th dose independent sin 8 NA
209 559.43 wind 9.0 270 < th dose independent rect. 21 9
215 559.68 humidity 50.0 270 > th dose independent rect. 4 7
236 561.01 humidity 50.0 270 > th dose dependent rect. 21 9
258 564.37 atmosphere 1015.0 270 < th dose independent rect. 6 15
259 564.46 temperature 15.0 270 > th dose independent rect. 17 17
263 564.76 wind 9.0 270 < th dose independent rect. 10 7
264 564.85 temperature 15.0 90 > th dose independent rect. 7 5
280 566.11 wind 9.0 270 < th dose independent rect. 17 17
291 566.15 humidity 50.0 270 > th dose independent rect. 17 17
292 566.28 temperature 10.0 270 > th dose independent rect. 10 7
293 566.28 atmosphere 1015.0 270 < th dose independent rect. 10 7
307 566.60 wind 9.0 270 < th dose independent rect. 6 15
315 566.90 radiation 1.0 270 < th dose dependent sin 8 NA
340 568.44 humidity 80.0 10 > th dose independent rect. 1 15
341 568.57 humidity 70.0 10 > th dose dependent sin 6 NA
360 569.63 temperature 30.0 270 < th dose independent rect. 4 7
366 569.88 atmosphere 995.0 270 > th dose independent rect. 17 17
376 570.59 precipitation 0.1 270 < th dose independent rect. 10 7
377 570.59 precipitation 0.1 270 < th dose dependent rect. 10 7
388 571.37 atmosphere 995.0 270 > th dose independent rect. 11 17
406 571.94 wind 1.0 270 > th dose independent rect. 10 7
412 572.32 precipitation 0.1 270 < th dose independent rect. 11 17
413 572.32 precipitation 0.1 270 < th dose dependent rect. 11 17
428 573.37 humidity 90.0 10 < th dose dependent rect. 6 6
439 574.26 humidity 70.0 10 > th dose dependent rect. 1 16
528 576.89 precipitation 0.1 270 < th dose independent rect. 22 8
529 576.89 precipitation 0.1 270 < th dose dependent rect. 22 8
557 578.67 humidity 90.0 10 < th dose dependent rect. 24 12
559 579.09 atmosphere 995.0 270 > th dose independent rect. 10 7
568 579.58 radiation 20.0 10 < th dose dependent rect. 1 15
576 580.20 humidity 80.0 10 < th dose independent rect. 20 16
583 580.63 radiation 1.0 270 > th dose independent rect. 7 3
598 581.43 atmosphere 1015.0 270 < th dose independent rect. 22 8
656 583.98 humidity 70.0 90 > th dose dependent rect. 23 12
683 585.45 temperature 15.0 270 > th dose independent rect. 7 3
711 585.55 temperature 30.0 270 < th dose independent rect. 17 17
720 585.85 temperature 10.0 90 > th dose dependent rect. 6 6
721 585.90 humidity 90.0 10 < th dose dependent sin 6 NA
736 586.60 atmosphere 995.0 270 > th dose independent rect. 6 16
762 587.88 wind 1.0 90 > th dose independent rect. 6 6
833 589.88 humidity 90.0 90 < th dose independent rect. 18 18
868 591.58 temperature 15.0 270 > th dose independent rect. 16 7
913 592.59 wind 9.0 10 < th dose independent rect. 7 5
927 593.34 humidity 80.0 10 < th dose independent rect. 9 3
948 594.17 precipitation 0.1 270 < th dose independent rect. 7 3
949 594.17 precipitation 0.1 270 < th dose dependent rect. 7 3
952 594.26 wind 7.0 270 < th dose independent rect. 7 3
953 594.36 temperature 30.0 270 < th dose independent rect. 7 3
957 594.47 temperature 10.0 10 > th dose dependent rect. 7 5
973 594.99 radiation 40.0 270 < th dose independent rect. 17 17
976 595.09 wind 1.0 90 > th dose independent rect. 12 18
982 595.34 wind 9.0 270 < th dose independent rect. 23 17
1000 595.82 atmosphere 995.0 270 > th dose independent rect. 7 3