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Os03g0764500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.31 (0.0324) R2 : 0.516
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.6 (0.0786) R2dC : 0.443 R2C : 0.418
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.577 (0.0681) R2dN8 : 0.0981 R2N8 : 0.0736
σ : 0.611
deviance : 170.51
__
_____
C
peak time of C : 10.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
153.88 0.583 6.32 0.248 1.18 0.682 -0.82 0.315 -0.596 8.7 11.26 91 -- --
154.21 0.578 6.33 0.243 1.18 0.696 -0.596 -- -0.601 8.66 11.26 91 -- --
155.52 0.581 6.33 0.233 1.16 0.72 -- 0.0211 -0.595 8.53 11.17 91 -- --
155.36 0.581 6.33 0.239 1.19 0.67 -- -- -0.6 8.76 11.25 91 -- --
206.24 0.669 6.35 0.358 -- 1.09 -- -0.0595 -0.616 -- 9.93 53 -- --
167.64 0.607 6.3 0.323 1.6 -- -0.269 -- -0.541 10.1 -- -- -- --
167.92 0.607 6.3 0.313 1.6 -- -- -- -0.542 10.1 -- -- -- --
203.02 0.664 6.35 0.411 -- 1.11 -- -- -0.565 -- 9.949 38 -- --
156.7 0.583 6.33 -- 1.18 0.697 -- -- -0.628 8.68 11.42 96 -- --
323.51 0.84 6.35 0.291 -- -- -- -- -0.544 -- -- -- -- --
170.51 0.611 6.31 -- 1.6 -- -- -- -0.577 10.1 -- -- -- --
203.04 0.666 6.37 -- -- 1.04 -- -- -0.64 -- 2.51 43 -- --
325.74 0.842 6.35 -- -- -- -- -- -0.576 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 150.50 temperature 25 90 > th dose independent rect. 17 15
2 150.69 temperature 25 10 > th dose dependent rect. 18 14
6 152.41 radiation 10 30 > th dose independent rect. 12 23
11 152.64 temperature 25 4320 > th dose dependent rect. 5 2
16 152.95 temperature 25 90 > th dose dependent rect. 20 12
24 153.59 radiation 10 90 < th dose independent rect. 5 23
25 153.60 temperature 25 4320 > th dose independent rect. 5 1
31 153.94 temperature 25 4320 < th dose independent rect. 5 1
32 154.18 radiation 10 90 > th dose independent rect. 9 23
33 154.27 radiation 10 90 > th dose independent no NA NA
34 154.27 radiation 10 90 > th dose independent rect. 6 12
113 154.36 radiation 10 90 < th dose independent rect. 9 23
114 154.36 radiation 10 90 < th dose independent rect. 20 23
131 154.50 radiation 10 90 < th dose independent rect. 12 23
134 154.60 radiation 10 90 < th dose independent rect. 15 23
136 154.67 temperature 10 30 > th dose dependent rect. 23 23
137 154.68 radiation 10 90 < th dose independent no NA NA
138 154.71 radiation 10 90 > th dose independent rect. 15 23
140 154.80 temperature 25 4320 > th dose independent rect. 2 5
144 154.99 radiation 10 90 < th dose independent rect. 1 23
148 155.05 temperature 25 4320 < th dose independent rect. 3 3
155 155.14 radiation 20 30 < th dose dependent rect. 17 23
157 155.18 atmosphere 1000 30 > th dose independent rect. 23 23
158 155.18 radiation 10 30 < th dose independent rect. 17 23
165 155.41 radiation 10 30 < th dose independent rect. 22 23
166 155.42 temperature 25 90 > th dose independent rect. 17 6
176 155.59 temperature 30 1440 > th dose independent rect. 9 5
195 155.65 radiation 20 90 < th dose dependent rect. 5 23
220 156.03 temperature 25 4320 > th dose dependent rect. 22 9
314 156.24 radiation 10 30 > th dose independent sin 12 NA
316 156.25 radiation 20 90 < th dose dependent rect. 20 23
317 156.33 temperature 30 1440 > th dose independent rect. 12 2
320 156.37 radiation 20 90 < th dose dependent rect. 9 23
344 156.54 radiation 20 90 < th dose dependent no NA NA
345 156.55 atmosphere 1000 30 > th dose independent rect. 17 23
346 156.56 temperature 25 90 > th dose independent sin 11 NA
363 156.61 radiation 20 90 < th dose dependent rect. 15 23
375 156.71 temperature 30 1440 > th dose independent sin 7 NA
388 156.79 radiation 20 90 < th dose dependent rect. 12 23
389 156.80 temperature 30 1440 < th dose independent sin 8 NA
397 156.83 radiation 20 30 < th dose dependent rect. 22 23
400 156.88 temperature 30 4320 < th dose independent rect. 11 1
403 156.89 radiation 10 30 > th dose independent rect. 15 20
413 156.93 radiation 20 90 < th dose dependent rect. 1 23
417 156.95 temperature 30 4320 < th dose independent rect. 1 11
421 156.97 temperature 30 4320 < th dose independent rect. 22 14
427 156.99 temperature 30 4320 < th dose independent rect. 20 16
429 156.99 temperature 25 4320 > th dose dependent rect. 22 1
461 157.08 radiation 20 90 < th dose independent sin 12 NA
471 157.10 radiation 10 90 < th dose independent rect. 6 12
497 157.13 radiation 10 90 > th dose independent rect. 12 20
539 157.25 temperature 20 30 > th dose dependent rect. 17 7
540 157.26 temperature 30 1440 > th dose dependent rect. 13 1
550 157.30 radiation 10 90 > th dose independent sin 23 NA
570 157.37 atmosphere 1005 30 > th dose dependent rect. 17 6
605 157.45 temperature 30 1440 < th dose independent rect. 16 22
606 157.45 radiation 1 14400 < th dose dependent rect. 23 1
610 157.47 temperature 25 90 < th dose independent rect. 12 21
629 157.54 atmosphere 1000 10 > th dose independent rect. 11 23
652 157.60 temperature 25 4320 > th dose dependent rect. 22 4
653 157.61 temperature 25 90 > th dose independent rect. 17 9
670 157.67 temperature 25 10 > th dose dependent sin 11 NA
682 157.70 temperature 30 1440 > th dose dependent rect. 10 4
689 157.72 temperature 25 4320 < th dose independent rect. 1 1
698 157.74 wind 9 10 < th dose independent rect. 23 23
703 157.75 radiation 10 90 > th dose dependent rect. 16 16
724 157.78 atmosphere 1000 270 < th dose independent rect. 3 22
728 157.80 radiation 10 90 < th dose independent rect. 15 20
788 157.89 radiation 10 90 > th dose independent rect. 15 17
796 157.91 wind 5 1440 < th dose independent rect. 11 1
883 158.05 wind 1 1440 < th dose independent rect. 3 2
919 158.07 atmosphere 1000 1440 > th dose independent rect. 23 1
955 158.11 radiation 10 90 < th dose independent rect. 6 17
967 158.14 atmosphere 1000 270 > th dose independent no NA NA
971 158.14 temperature 30 1440 > th dose dependent sin 7 NA