Os03g0762700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0762700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.17 | 0.319 | 9.85 | -0.276 | 0.244 | -0.756 | -0.667 | 0.199 | 0.0566 | 2.18 | 21.78 | 1209 | -- | -- |
| 46.18 | 0.317 | 9.85 | -0.256 | 0.242 | -0.811 | -0.673 | -- | 0.0627 | 2.19 | 21.54 | 1190 | -- | -- |
| 47.66 | 0.322 | 9.86 | -0.282 | 0.232 | -0.696 | -- | 0.496 | 0.055 | 2.18 | 21.78 | 1083 | -- | -- |
| 47.86 | 0.322 | 9.85 | -0.241 | 0.23 | -0.826 | -- | -- | 0.0669 | 2.24 | 21.5 | 1089 | -- | -- |
| 50.66 | 0.332 | 9.85 | -0.279 | -- | -0.806 | -- | 0.342 | 0.0548 | -- | 21.75 | 992 | -- | -- |
| 52 | 0.338 | 9.83 | -0.0489 | 0.283 | -- | -0.752 | -- | 0.162 | 2.19 | -- | -- | -- | -- |
| 54.1 | 0.344 | 9.83 | -0.0272 | 0.281 | -- | -- | -- | 0.167 | 1.96 | -- | -- | -- | -- |
| 50.77 | 0.332 | 9.85 | -0.242 | -- | -0.886 | -- | -- | 0.0632 | -- | 21.62 | 991 | -- | -- |
| 49.1 | 0.326 | 9.84 | -- | 0.236 | -0.659 | -- | -- | 0.104 | 2.32 | 21.59 | 982 | -- | -- |
| 58.86 | 0.358 | 9.82 | -0.0155 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 54.12 | 0.344 | 9.82 | -- | 0.281 | -- | -- | -- | 0.17 | 1.95 | -- | -- | -- | -- |
| 52.15 | 0.336 | 9.84 | -- | -- | -0.749 | -- | -- | 0.103 | -- | 21.61 | 973 | -- | -- |
| 58.86 | 0.358 | 9.82 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.27 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 2 | 33.27 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 6 | 33.78 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 10 | 7 |
| 10 | 34.63 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 13 | 35.98 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 14 | 35.98 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 22 | 38.37 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 26 | 38.60 | temperature | 20.0 | 30 | < th | dose independent | rect. | 14 | 3 |
| 30 | 38.61 | temperature | 20.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 84 | 41.04 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 85 | 41.05 | temperature | 20.0 | 10 | < th | dose independent | rect. | 12 | 5 |
| 87 | 41.06 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 89 | 41.10 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 6 |
| 114 | 42.02 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 115 | 42.05 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 138 | 42.74 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 140 | 42.76 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 7 |
| 147 | 42.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 7 |
| 148 | 42.88 | temperature | 20.0 | 10 | < th | dose independent | rect. | 10 | 7 |
| 152 | 42.91 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 10 |
| 223 | 43.74 | temperature | 20.0 | 90 | < th | dose independent | sin | 21 | NA |
| 230 | 43.80 | temperature | 20.0 | 90 | > th | dose independent | sin | 21 | NA |
| 248 | 43.88 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 254 | 43.92 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 260 | 43.95 | temperature | 20.0 | 720 | < th | dose independent | sin | 2 | NA |
| 263 | 44.00 | temperature | 20.0 | 720 | > th | dose independent | sin | 2 | NA |
| 273 | 44.05 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 3 |
| 292 | 44.18 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 299 | 44.23 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 346 | 44.41 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 369 | 44.48 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 10 | 7 |
| 372 | 44.50 | temperature | 15.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 413 | 44.57 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 6 | 6 |
| 434 | 44.64 | temperature | 20.0 | 10 | < th | dose independent | sin | 20 | NA |
| 446 | 44.66 | temperature | 20.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 475 | 44.75 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 495 | 44.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 14 |
| 691 | 45.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 693 | 45.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 701 | 45.15 | temperature | 20.0 | 90 | < th | dose independent | rect. | 11 | 12 |
| 763 | 45.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 765 | 45.26 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 14 |
| 845 | 45.38 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 948 | 45.52 | temperature | 25.0 | 270 | < th | dose dependent | sin | 22 | NA |
| 952 | 45.53 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 16 | 4 |
| 967 | 45.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 986 | 45.57 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 17 |