Os03g0762500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0762500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.36 | 0.638 | 6.47 | -1.27 | 0.0245 | 1.53 | 1.44 | -1.84 | -0.341 | 2.2 | 18.1 | 523 | -- | -- |
| 186.61 | 0.636 | 6.43 | -0.921 | 0.0245 | 1.51 | 1.71 | -- | -0.246 | 3.09 | 17.9 | 520 | -- | -- |
| 191.65 | 0.645 | 6.48 | -1.38 | 0.0828 | 1.54 | -- | -2.28 | -0.362 | 2 | 18 | 457 | -- | -- |
| 195.67 | 0.652 | 6.43 | -0.944 | 0.0078 | 1.44 | -- | -- | -0.245 | 2.29 | 17.9 | 542 | -- | -- |
| 191.98 | 0.645 | 6.48 | -1.35 | -- | 1.52 | -- | -2.13 | -0.355 | -- | 18 | 490 | -- | -- |
| 225.51 | 0.704 | 6.38 | -0.576 | 0.464 | -- | -1.07 | -- | 0.0119 | 17.7 | -- | -- | -- | -- |
| 226.5 | 0.705 | 6.39 | -0.575 | 0.492 | -- | -- | -- | 0.00548 | 19 | -- | -- | -- | -- |
| 195.67 | 0.652 | 6.43 | -0.944 | -- | 1.43 | -- | -- | -0.244 | -- | 17.9 | 543 | -- | -- |
| 216.68 | 0.686 | 6.39 | -- | 0.204 | 1.02 | -- | -- | -0.0586 | 21.5 | 18.02 | 429 | -- | -- |
| 239.22 | 0.723 | 6.38 | -0.585 | -- | -- | -- | -- | -0.00348 | -- | -- | -- | -- | -- |
| 235.22 | 0.717 | 6.37 | -- | 0.498 | -- | -- | -- | 0.0695 | 19 | -- | -- | -- | -- |
| 217.29 | 0.687 | 6.4 | -- | -- | 1.12 | -- | -- | -0.0994 | -- | 18.73 | 521 | -- | -- |
| 248.25 | 0.735 | 6.36 | -- | -- | -- | -- | -- | 0.0614 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 178.62 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 18 |
| 2 | 178.82 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 20 |
| 3 | 179.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 24 | 183.00 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 10 |
| 27 | 183.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 18 |
| 53 | 184.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 75 | 184.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 89 | 185.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 93 | 185.24 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 95 | 185.27 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 102 | 185.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 113 | 185.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 114 | 185.42 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 115 | 185.43 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 7 |
| 120 | 185.47 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 122 | 185.50 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 161 | 185.78 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 168 | 185.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 186 | 185.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 215 | 186.09 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 247 | 186.24 | temperature | 25 | 720 | < th | dose dependent | sin | 14 | NA |
| 280 | 186.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 311 | 186.54 | temperature | 30 | 720 | < th | dose dependent | sin | 12 | NA |
| 350 | 186.68 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 360 | 186.70 | radiation | 1 | 4320 | < th | dose dependent | rect. | 20 | 10 |
| 367 | 186.71 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 370 | 186.72 | temperature | 15 | 1440 | > th | dose dependent | sin | 15 | NA |
| 463 | 186.94 | humidity | 90 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 477 | 186.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 16 |
| 493 | 187.01 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 552 | 187.20 | temperature | 15 | 10 | > th | dose dependent | sin | 11 | NA |
| 563 | 187.22 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 568 | 187.23 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 577 | 187.25 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 587 | 187.27 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 604 | 187.30 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 632 | 187.34 | temperature | 20 | 270 | < th | dose independent | rect. | 22 | 6 |
| 633 | 187.34 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 13 |
| 647 | 187.36 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 662 | 187.39 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 664 | 187.39 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 669 | 187.40 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 806 | 187.67 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 826 | 187.72 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 17 |
| 839 | 187.74 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 840 | 187.74 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 894 | 187.88 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 911 | 187.90 | wind | 3 | 43200 | > th | dose dependent | rect. | 7 | 9 |
| 933 | 187.94 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 958 | 187.99 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 963 | 188.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 982 | 188.03 | wind | 5 | 43200 | < th | dose independent | sin | 1 | NA |