Os03g0762300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase 51 precursor (EC 1.11.1.7) (Atperox P51) (ATP37).
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Os03g0762300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase 51 precursor (EC 1.11.1.7) (Atperox P51) (ATP37).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 145.28 | 0.566 | 11.2 | -1.27 | 1.12 | -2.53 | 1.51 | 0.784 | 0.475 | 18.8 | 24.47 | 802 | -- | -- |
| 143.32 | 0.558 | 11.2 | -1.18 | 1.17 | -2.79 | 1.28 | -- | 0.549 | 18.8 | 23.38 | 903 | -- | -- |
| 148.77 | 0.568 | 11.2 | -1.42 | 1.22 | -2.63 | -- | 0.862 | 0.461 | 18.9 | 23.94 | 959 | -- | -- |
| 147.65 | 0.566 | 11.2 | -1.21 | 1.22 | -2.82 | -- | -- | 0.543 | 18.8 | 23.35 | 962 | -- | -- |
| 196.67 | 0.653 | 11.2 | -1.4 | -- | -2.9 | -- | 1.38 | 0.347 | -- | 29.7 | 590 | -- | -- |
| 245.85 | 0.735 | 11.1 | -0.398 | 1.33 | -- | 1.19 | -- | 1.02 | 19.5 | -- | -- | -- | -- |
| 249.75 | 0.74 | 11.1 | -0.428 | 1.33 | -- | -- | -- | 1.03 | 19.6 | -- | -- | -- | -- |
| 198.57 | 0.656 | 11.2 | -1.24 | -- | -2.97 | -- | -- | 0.4 | -- | 29.29 | 587 | -- | -- |
| 180.57 | 0.626 | 11.1 | -- | 1.21 | -2.2 | -- | -- | 0.751 | 18.9 | 23.6 | 881 | -- | -- |
| 344.3 | 0.867 | 11.1 | -0.446 | -- | -- | -- | -- | 1.01 | -- | -- | -- | -- | -- |
| 254.57 | 0.746 | 11.1 | -- | 1.33 | -- | -- | -- | 1.07 | 19.6 | -- | -- | -- | -- |
| 233.47 | 0.712 | 11.1 | -- | -- | -2.49 | -- | -- | 0.632 | -- | 29.6 | 563 | -- | -- |
| 349.56 | 0.873 | 11 | -- | -- | -- | -- | -- | 1.06 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 20 |
| 3 | 146.29 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 50 | 148.52 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 51 | 148.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 61 | 148.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 92 | 149.96 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 109 | 150.41 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 254 | 153.70 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 347 | 154.83 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 21 |
| 364 | 155.15 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 374 | 155.28 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 411 | 155.92 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 5 |
| 413 | 156.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 7 |
| 440 | 156.27 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 449 | 156.40 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 464 | 156.61 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 22 |
| 470 | 156.71 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 19 |
| 492 | 157.02 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 22 |
| 505 | 157.19 | temperature | 20 | 720 | < th | dose independent | rect. | 18 | 21 |
| 566 | 157.72 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |
| 567 | 157.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 4 |
| 602 | 157.96 | temperature | 20 | 1440 | > th | dose independent | sin | 15 | NA |
| 668 | 158.30 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 680 | 158.37 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 23 |
| 685 | 158.41 | temperature | 20 | 720 | > th | dose independent | rect. | 24 | 23 |
| 690 | 158.44 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 762 | 158.67 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 798 | 158.85 | temperature | 20 | 1440 | < th | dose independent | sin | 15 | NA |
| 877 | 159.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 998 | 159.77 | temperature | 25 | 720 | < th | dose dependent | sin | 2 | NA |