Os03g0761500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Subtilisin-like protease (Fragment).
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Os03g0761500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Subtilisin-like protease (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 411.37 | 0.953 | 9.17 | -2.83 | 2.52 | -1.42 | 0.727 | -0.0349 | -1.15 | 12.4 | 72.33 | 1453 | -- | -- |
| 409.27 | 0.942 | 9.17 | -2.82 | 2.54 | -1.47 | 0.732 | -- | -1.15 | 12.4 | 73.06 | 1441 | -- | -- |
| 411.16 | 0.944 | 9.18 | -2.74 | 2.55 | -1.44 | -- | -0.235 | -1.17 | 12.5 | 73.01 | 1444 | -- | -- |
| 411.34 | 0.945 | 9.17 | -2.8 | 2.53 | -1.46 | -- | -- | -1.15 | 12.5 | 73.69 | 1444 | -- | -- |
| 578.77 | 1.13 | 9.16 | -2.74 | -- | -1.67 | -- | -0.812 | -0.931 | -- | 78 | 23 | -- | -- |
| 486.01 | 1.03 | 9.13 | -2.56 | 2.56 | -- | 0.472 | -- | -0.963 | 12.4 | -- | -- | -- | -- |
| 486.96 | 1.03 | 9.13 | -2.54 | 2.56 | -- | -- | -- | -0.96 | 12.4 | -- | -- | -- | -- |
| 581.77 | 1.12 | 9.15 | -2.53 | -- | -1.68 | -- | -- | -0.976 | -- | 83 | 2 | -- | -- |
| 581.41 | 1.12 | 9.12 | -- | 2.63 | -2.07 | -- | -- | -0.853 | 12.7 | 84.11 | 1389 | -- | -- |
| 897.03 | 1.4 | 9.18 | -2.62 | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
| 656.65 | 1.2 | 9.06 | -- | 2.59 | -- | -- | -- | -0.678 | 12.5 | -- | -- | -- | -- |
| 758.09 | 1.28 | 9.11 | -- | -- | -1.68 | -- | -- | -0.707 | -- | 82.93 | 2 | -- | -- |
| 1078.74 | 1.53 | 9.11 | -- | -- | -- | -- | -- | -0.711 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 401.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 6 | 402.87 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 3 |
| 7 | 403.39 | humidity | 90.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 9 | 403.48 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 10 | 403.48 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 3 |
| 21 | 405.40 | humidity | 80.0 | 720 | > th | dose independent | rect. | 11 | 10 |
| 22 | 405.46 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 26 | 405.82 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 27 | 406.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 12 |
| 33 | 406.32 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 55 | 407.59 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 12 |
| 67 | 408.05 | humidity | 80.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 90 | 408.91 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 94 | 409.00 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 15 | 14 |
| 101 | 409.20 | humidity | 80.0 | 1440 | < th | dose independent | sin | 0 | NA |
| 144 | 410.18 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 192 | 411.15 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 199 | 411.36 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 209 | 411.50 | humidity | 60.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 218 | 411.62 | humidity | 70.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 281 | 412.64 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 2 | 18 |
| 339 | 413.39 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 348 | 413.49 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 23 | NA |
| 407 | 414.06 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 5 |
| 437 | 414.28 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 13 |
| 451 | 414.40 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 544 | 415.09 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 13 | 19 |
| 627 | 415.53 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 629 | 415.53 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 10 |
| 693 | 415.80 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 715 | 415.90 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 726 | 415.94 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 730 | 415.97 | humidity | 60.0 | 1440 | > th | dose dependent | no | NA | NA |
| 741 | 416.04 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 751 | 416.07 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 17 |
| 753 | 416.07 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 7 | 23 |
| 754 | 416.08 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 809 | 416.35 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 818 | 416.42 | humidity | 80.0 | 720 | < th | dose independent | rect. | 12 | 9 |
| 824 | 416.43 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 837 | 416.47 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 875 | 416.60 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 935 | 416.79 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 997 | 416.98 | humidity | 90.0 | 720 | < th | dose independent | rect. | 13 | 11 |