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Os03g0760900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.66 (0.0243) R2 : 0.504
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.04 (0.0635) R2dC : 0.293 R2C : 0.213
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.736 (0.0512) R2dN8 : 0.291 R2N8 : 0.211
σ : 0.459
deviance : 96.25
__
_____
C
peak time of C : 5.17
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
76.49 0.411 7.73 -0.284 1.06 -0.0966 0.545 -2.88 -0.814 5.04 0.03858 3963 -- --
82.03 0.422 7.68 -0.168 1.03 -0.538 0.463 -- -0.822 5.05 0.4927 6924 -- --
77.08 0.409 7.74 -0.316 1.06 0.0099 -- -3.13 -0.814 5.12 0.2024 3804 -- --
82.33 0.423 7.69 -0.234 1.05 -0.521 -- -- -0.833 5.17 0.4897 6956 -- --
136.67 0.544 7.75 -0.269 -- -0.0619 -- -2.75 -0.791 -- 0.1621 4119 -- --
90.33 0.446 7.67 -0.459 1.04 -- 0.389 -- -0.786 5.09 -- -- -- --
90.7 0.446 7.67 -0.459 1.05 -- -- -- -0.787 5.16 -- -- -- --
136.41 0.544 7.7 -0.112 -- -0.717 -- -- -0.82 -- 0.5 17244 -- --
80.54 0.418 7.69 -- 1.04 -0.729 -- -- -0.836 5.15 0.6059 17198 -- --
148.15 0.569 7.69 -0.422 -- -- -- -- -0.761 -- -- -- -- --
96.25 0.459 7.66 -- 1.04 -- -- -- -0.736 5.17 -- -- -- --
136.2 0.544 7.71 -- -- -0.72 -- -- -0.842 -- 0.8817 21852 -- --
152.85 0.577 7.68 -- -- -- -- -- -0.714 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 76.37 precipitation 0.1 4320 > th dose dependent rect. 16 1
2 76.39 wind 3.0 14400 < th dose independent rect. 20 9
3 76.61 precipitation 0.1 4320 > th dose dependent rect. 18 23
5 76.66 wind 3.0 14400 > th dose independent rect. 20 9
6 76.67 precipitation 0.1 4320 > th dose dependent rect. 16 22
8 76.70 wind 3.0 14400 < th dose independent rect. 24 1
10 76.73 precipitation 0.1 4320 < th dose independent rect. 16 1
11 76.73 precipitation 0.1 4320 > th dose dependent sin 12 NA
12 76.73 precipitation 0.1 4320 < th dose dependent rect. 16 1
13 76.73 precipitation 0.1 4320 > th dose dependent rect. 2 23
15 76.75 precipitation 0.1 4320 > th dose dependent rect. 8 22
17 76.75 precipitation 0.1 4320 > th dose dependent rect. 11 23
19 76.76 precipitation 0.1 4320 > th dose dependent rect. 5 23
20 76.77 precipitation 0.1 4320 > th dose dependent rect. 11 19
22 76.78 precipitation 0.1 4320 > th dose dependent no NA NA
31 76.80 precipitation 0.1 4320 > th dose dependent rect. 13 23
36 76.82 precipitation 0.1 4320 > th dose dependent rect. 23 23
37 76.83 precipitation 0.1 4320 > th dose independent rect. 16 1
50 76.88 precipitation 0.1 4320 > th dose independent rect. 21 23
54 76.89 precipitation 0.1 4320 < th dose independent rect. 21 23
55 76.89 precipitation 0.1 4320 > th dose dependent rect. 16 18
56 76.89 precipitation 0.1 4320 > th dose dependent rect. 16 20
60 76.89 precipitation 0.1 4320 < th dose dependent rect. 21 23
66 76.91 precipitation 0.1 4320 > th dose dependent rect. 16 14
68 76.91 precipitation 0.1 4320 > th dose dependent rect. 21 23
80 76.94 precipitation 0.1 4320 > th dose independent rect. 2 20
81 76.94 precipitation 0.1 4320 > th dose independent rect. 23 23
89 76.96 precipitation 0.1 4320 < th dose independent rect. 23 23
90 76.96 precipitation 0.1 4320 > th dose dependent rect. 21 20
92 76.96 precipitation 0.1 4320 < th dose dependent rect. 23 23
93 76.97 wind 3.0 14400 < th dose independent rect. 24 4
103 77.01 precipitation 0.1 4320 < th dose independent rect. 2 20
108 77.01 precipitation 0.1 4320 < th dose dependent rect. 2 20
127 77.07 precipitation 0.1 4320 < th dose independent rect. 16 18
129 77.07 precipitation 0.1 4320 < th dose dependent rect. 16 18
135 77.09 precipitation 0.1 4320 < th dose independent rect. 16 20
136 77.09 precipitation 0.1 4320 > th dose independent rect. 16 21
139 77.09 precipitation 0.1 4320 < th dose dependent rect. 16 20
144 77.10 precipitation 0.1 4320 > th dose dependent rect. 18 19
173 77.15 precipitation 0.1 4320 > th dose independent rect. 16 18
186 77.16 precipitation 0.1 4320 < th dose independent rect. 11 23
188 77.16 precipitation 0.1 4320 < th dose dependent rect. 11 23
189 77.17 precipitation 0.1 4320 < th dose independent rect. 16 14
193 77.17 precipitation 0.1 4320 < th dose dependent rect. 16 14
207 77.19 precipitation 0.1 4320 > th dose independent rect. 7 23
208 77.19 precipitation 0.1 4320 > th dose independent rect. 11 23
210 77.19 precipitation 0.1 4320 < th dose independent rect. 2 23
211 77.19 precipitation 0.1 4320 < th dose independent rect. 7 23
214 77.19 precipitation 0.1 4320 < th dose dependent rect. 2 23
215 77.19 precipitation 0.1 4320 < th dose dependent rect. 7 23
219 77.20 precipitation 0.1 4320 < th dose independent rect. 11 19
225 77.20 precipitation 0.1 4320 > th dose dependent rect. 18 16
227 77.20 precipitation 0.1 4320 < th dose dependent rect. 11 19
261 77.24 precipitation 0.1 4320 > th dose independent no NA NA
262 77.24 precipitation 0.1 4320 < th dose independent no NA NA
268 77.24 precipitation 0.1 4320 < th dose dependent no NA NA
269 77.24 precipitation 0.1 4320 > th dose dependent rect. 2 15
280 77.25 precipitation 0.1 4320 > th dose independent rect. 11 19
284 77.25 precipitation 0.1 4320 > th dose independent rect. 5 23
291 77.26 wind 3.0 14400 > th dose independent rect. 24 1
300 77.26 precipitation 0.1 4320 < th dose independent rect. 5 23
305 77.26 precipitation 0.1 4320 < th dose dependent rect. 5 23
324 77.28 wind 3.0 43200 < th dose dependent rect. 20 11
325 77.28 precipitation 0.1 4320 > th dose dependent rect. 18 12
336 77.30 wind 3.0 14400 < th dose independent rect. 2 2
337 77.30 precipitation 0.1 14400 < th dose independent rect. 16 5
344 77.30 precipitation 0.1 14400 < th dose dependent rect. 16 5
345 77.30 wind 1.0 14400 > th dose dependent rect. 20 9
350 77.31 precipitation 0.1 14400 > th dose independent rect. 16 5
370 77.33 wind 5.0 14400 < th dose dependent rect. 20 9
371 77.33 wind 3.0 43200 < th dose dependent rect. 21 16
382 77.35 precipitation 0.1 4320 > th dose dependent sin 3 NA
391 77.37 wind 5.0 14400 < th dose dependent rect. 24 4
406 77.40 precipitation 0.1 4320 > th dose dependent rect. 18 10
418 77.43 precipitation 0.1 14400 < th dose independent rect. 13 8
421 77.43 precipitation 0.1 14400 < th dose dependent rect. 13 8
422 77.44 precipitation 0.1 14400 > th dose independent rect. 13 8
432 77.45 precipitation 0.1 4320 > th dose independent rect. 18 23
434 77.45 precipitation 0.1 4320 < th dose independent rect. 18 23
438 77.45 precipitation 0.1 4320 < th dose dependent rect. 18 23
455 77.48 precipitation 0.1 14400 > th dose independent rect. 11 10
465 77.49 precipitation 0.1 14400 > th dose dependent rect. 17 3
480 77.51 precipitation 0.1 14400 < th dose independent rect. 11 10
487 77.51 precipitation 0.1 14400 < th dose dependent rect. 11 10
499 77.53 wind 9.0 14400 < th dose dependent rect. 20 9
520 77.56 wind 3.0 14400 > th dose independent rect. 3 1
524 77.57 wind 3.0 14400 > th dose independent rect. 24 5
529 77.58 wind 3.0 43200 > th dose independent rect. 6 1
550 77.61 wind 3.0 14400 < th dose dependent rect. 24 1
552 77.61 humidity 80.0 43200 < th dose dependent rect. 4 1
558 77.62 wind 3.0 43200 < th dose independent rect. 6 1
572 77.64 wind 3.0 43200 < th dose dependent sin 9 NA
593 77.67 wind 1.0 14400 > th dose dependent rect. 24 1
609 77.69 precipitation 0.1 4320 > th dose dependent rect. 11 6
614 77.70 precipitation 0.1 4320 > th dose independent rect. 3 14
618 77.71 precipitation 0.1 4320 > th dose independent sin 2 NA
630 77.72 wind 3.0 43200 < th dose independent rect. 18 13
650 77.74 precipitation 0.1 14400 > th dose independent sin 21 NA
653 77.74 precipitation 0.1 14400 > th dose dependent rect. 19 2
655 77.74 precipitation 0.1 4320 > th dose dependent rect. 8 9
664 77.76 precipitation 0.1 14400 < th dose independent sin 20 NA
673 77.76 precipitation 0.1 14400 < th dose dependent sin 20 NA
699 77.81 precipitation 0.1 4320 < th dose independent rect. 3 14
701 77.81 precipitation 0.1 4320 < th dose dependent rect. 3 14
724 77.86 wind 3.0 43200 > th dose independent rect. 18 13
737 77.87 precipitation 0.1 14400 > th dose dependent rect. 13 8
759 77.90 precipitation 0.1 4320 < th dose independent sin 2 NA
767 77.90 precipitation 0.1 4320 < th dose dependent sin 2 NA
770 77.90 wind 1.0 14400 > th dose dependent rect. 24 4
771 77.90 humidity 80.0 43200 < th dose dependent rect. 1 4
781 77.91 precipitation 0.1 4320 > th dose dependent rect. 5 12
852 78.00 humidity 80.0 43200 < th dose dependent rect. 1 1
871 78.03 precipitation 0.1 14400 < th dose independent rect. 13 12
877 78.03 precipitation 0.1 14400 < th dose dependent rect. 13 12
922 78.07 precipitation 0.1 14400 < th dose independent rect. 9 16
934 78.07 precipitation 0.1 14400 < th dose dependent rect. 9 16
946 78.08 precipitation 0.1 14400 > th dose independent rect. 9 16
986 78.10 wind 1.0 14400 > th dose dependent rect. 20 17