Os03g0760700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0760700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 125.82 | 0.527 | 10.5 | -0.676 | 1.29 | 1.48 | 0.837 | -0.0262 | -0.479 | 17.6 | 25.5 | 84 | -- | -- |
| 125.48 | 0.522 | 10.5 | -0.671 | 1.32 | 1.48 | 0.859 | -- | -0.478 | 17.6 | 25.61 | 62 | -- | -- |
| 127.28 | 0.525 | 10.5 | -0.646 | 1.29 | 1.48 | -- | 0.545 | -0.477 | 17.6 | 25.59 | 78 | -- | -- |
| 127.22 | 0.525 | 10.5 | -0.675 | 1.33 | 1.55 | -- | -- | -0.451 | 17.6 | 25.9 | 60 | -- | -- |
| 179.48 | 0.624 | 10.5 | -0.798 | -- | 2.4 | -- | 0.27 | -0.604 | -- | 24.37 | 202 | -- | -- |
| 160.52 | 0.594 | 10.5 | -0.445 | 1.82 | -- | 1.3 | -- | -0.395 | 17 | -- | -- | -- | -- |
| 164.83 | 0.601 | 10.5 | -0.442 | 1.83 | -- | -- | -- | -0.388 | 16.9 | -- | -- | -- | -- |
| 179.02 | 0.623 | 10.5 | -0.889 | -- | 2.43 | -- | -- | -0.655 | -- | 24.4 | 198 | -- | -- |
| 138.52 | 0.551 | 10.5 | -- | 1.47 | 1.45 | -- | -- | -0.356 | 17.6 | 26.46 | 56 | -- | -- |
| 340.42 | 0.862 | 10.5 | -0.508 | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
| 169.97 | 0.61 | 10.5 | -- | 1.83 | -- | -- | -- | -0.339 | 16.9 | -- | -- | -- | -- |
| 199.33 | 0.658 | 10.5 | -- | -- | 2.3 | -- | -- | -0.539 | -- | 24.5 | 202 | -- | -- |
| 347.24 | 0.87 | 10.5 | -- | -- | -- | -- | -- | -0.379 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.64 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 5 | 120.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 6 | 120.83 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 7 | 120.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 16 |
| 9 | 121.03 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 10 | 121.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 12 | 121.32 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 16 |
| 13 | 121.34 | temperature | 25.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 16 | 121.49 | temperature | 10.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 21 | 121.72 | temperature | 10.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 24 | 121.80 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 60 | 122.57 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 62 | 122.68 | temperature | 25.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 121 | 123.90 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 20 |
| 137 | 124.30 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 144 | 124.48 | temperature | 30.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 146 | 124.52 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 175 | 125.00 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 180 | 125.08 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 236 | 125.72 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 243 | 125.79 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 19 |
| 246 | 125.81 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 21 |
| 317 | 126.27 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 15 |
| 328 | 126.31 | temperature | 25.0 | 90 | > th | dose dependent | no | NA | NA |
| 544 | 127.74 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 14 |
| 549 | 127.76 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 16 |
| 629 | 128.29 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 13 |
| 660 | 128.47 | temperature | 30.0 | 90 | < th | dose independent | sin | 2 | NA |
| 677 | 128.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 729 | 129.00 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 765 | 129.27 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 766 | 129.27 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 773 | 129.31 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 8 | 3 |
| 787 | 129.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 801 | 129.45 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 831 | 129.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 832 | 129.65 | temperature | 30.0 | 90 | > th | dose independent | sin | 2 | NA |
| 848 | 129.74 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 937 | 130.29 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 995 | 130.63 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 13 |