Os03g0760300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os03g0760300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 312.58 | 0.831 | 3.19 | 0.16 | 0.125 | 0.814 | 0.612 | 1.95 | 0.103 | 17.7 | 20 | 195 | -- | -- |
| 324.88 | 0.839 | 3.15 | 0.393 | 0.08 | 0.508 | -0.0884 | -- | 0.164 | 17.6 | 20.43 | 208 | -- | -- |
| 313.24 | 0.824 | 3.19 | 0.149 | 0.139 | 0.782 | -- | 1.81 | 0.102 | 19 | 19.9 | 190 | -- | -- |
| 324.55 | 0.839 | 3.15 | 0.387 | 0.11 | 0.488 | -- | -- | 0.16 | 20.5 | 20.47 | 208 | -- | -- |
| 314.18 | 0.826 | 3.18 | 0.167 | -- | 0.756 | -- | 1.75 | 0.102 | -- | 19.91 | 190 | -- | -- |
| 332.86 | 0.855 | 3.17 | 0.24 | 0.139 | -- | 0.157 | -- | 0.0635 | 23.3 | -- | -- | -- | -- |
| 332.96 | 0.855 | 3.17 | 0.234 | 0.139 | -- | -- | -- | 0.063 | 23.1 | -- | -- | -- | -- |
| 325.19 | 0.84 | 3.15 | 0.381 | -- | 0.488 | -- | -- | 0.157 | -- | 20.46 | 194 | -- | -- |
| 328.14 | 0.844 | 3.16 | -- | 0.111 | 0.403 | -- | -- | 0.106 | 20.8 | 20.5 | 193 | -- | -- |
| 334.17 | 0.854 | 3.17 | 0.237 | -- | -- | -- | -- | 0.0642 | -- | -- | -- | -- | -- |
| 334.4 | 0.855 | 3.18 | -- | 0.141 | -- | -- | -- | 0.037 | 23.2 | -- | -- | -- | -- |
| 327.54 | 0.843 | 3.16 | -- | -- | 0.453 | -- | -- | 0.102 | -- | 20 | 102 | -- | -- |
| 335.65 | 0.855 | 3.17 | -- | -- | -- | -- | -- | 0.0379 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 299.14 | temperature | 20 | 270 | < th | dose independent | rect. | 19 | 1 |
| 2 | 301.20 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 6 |
| 5 | 301.29 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 9 |
| 12 | 301.57 | wind | 9 | 90 | > th | dose independent | rect. | 13 | 2 |
| 13 | 302.91 | wind | 9 | 90 | > th | dose dependent | rect. | 13 | 2 |
| 24 | 304.70 | temperature | 20 | 90 | < th | dose independent | sin | 22 | NA |
| 25 | 305.03 | temperature | 20 | 90 | > th | dose independent | sin | 22 | NA |
| 26 | 305.03 | temperature | 20 | 90 | < th | dose independent | rect. | 2 | 21 |
| 34 | 306.39 | temperature | 20 | 270 | < th | dose dependent | rect. | 12 | 8 |
| 35 | 306.41 | temperature | 20 | 270 | < th | dose dependent | rect. | 14 | 6 |
| 38 | 306.46 | temperature | 20 | 270 | < th | dose dependent | rect. | 17 | 3 |
| 43 | 307.48 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 53 | 307.48 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 64 | 307.83 | wind | 5 | 270 | > th | dose dependent | rect. | 12 | 2 |
| 86 | 308.77 | humidity | 80 | 10 | < th | dose dependent | rect. | 20 | 4 |
| 102 | 309.10 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 18 |
| 157 | 309.90 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 5 |
| 166 | 310.20 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 8 |
| 167 | 310.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 171 | 310.28 | temperature | 20 | 10 | < th | dose dependent | sin | 22 | NA |
| 196 | 310.95 | temperature | 20 | 10 | < th | dose dependent | rect. | 3 | 20 |
| 250 | 312.12 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 252 | 312.13 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 23 |
| 260 | 312.23 | wind | 7 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 274 | 312.74 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 12 | 10 |
| 277 | 312.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 20 |
| 288 | 313.09 | wind | 7 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 290 | 313.12 | wind | 5 | 720 | < th | dose independent | rect. | 6 | 20 |
| 298 | 313.20 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 22 |
| 299 | 313.21 | wind | 5 | 10 | > th | dose dependent | rect. | 20 | 2 |
| 315 | 313.43 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 321 | 313.46 | temperature | 20 | 270 | < th | dose independent | rect. | 9 | 20 |
| 326 | 313.48 | temperature | 10 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 334 | 313.50 | temperature | 20 | 270 | < th | dose independent | rect. | 14 | 15 |
| 340 | 313.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 21 |
| 361 | 313.76 | temperature | 20 | 90 | < th | dose independent | rect. | 14 | 23 |
| 363 | 313.77 | temperature | 20 | 90 | < th | dose independent | rect. | 15 | 21 |
| 367 | 313.78 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 8 |
| 370 | 313.79 | temperature | 20 | 90 | < th | dose independent | rect. | 10 | 23 |
| 371 | 313.80 | temperature | 20 | 90 | < th | dose independent | no | NA | NA |
| 381 | 313.81 | temperature | 20 | 90 | < th | dose independent | rect. | 17 | 23 |
| 436 | 313.93 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 22 |
| 455 | 314.07 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 475 | 314.24 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 16 |
| 481 | 314.26 | wind | 5 | 270 | > th | dose dependent | rect. | 18 | 3 |
| 488 | 314.36 | temperature | 20 | 90 | > th | dose independent | no | NA | NA |
| 504 | 314.46 | wind | 5 | 720 | > th | dose independent | rect. | 8 | 15 |
| 508 | 314.47 | humidity | 80 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 510 | 314.47 | temperature | 20 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 515 | 314.49 | temperature | 20 | 90 | < th | dose independent | rect. | 5 | 23 |
| 588 | 314.84 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 15 |
| 595 | 314.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 597 | 314.88 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 18 |
| 601 | 314.92 | wind | 5 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 610 | 314.96 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |
| 636 | 315.11 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 647 | 315.20 | wind | 5 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 653 | 315.25 | wind | 5 | 720 | < th | dose independent | rect. | 11 | 15 |
| 654 | 315.25 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 23 |
| 657 | 315.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 706 | 315.44 | temperature | 25 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 723 | 315.48 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 15 |
| 773 | 315.63 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 781 | 315.64 | wind | 7 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 786 | 315.65 | wind | 5 | 720 | > th | dose independent | rect. | 15 | 23 |
| 792 | 315.67 | wind | 5 | 720 | < th | dose independent | rect. | 21 | 21 |
| 795 | 315.67 | wind | 5 | 270 | > th | dose dependent | rect. | 19 | 1 |
| 798 | 315.68 | temperature | 20 | 1440 | > th | dose independent | sin | 17 | NA |
| 826 | 315.75 | wind | 7 | 1440 | < th | dose independent | rect. | 2 | 7 |
| 836 | 315.77 | temperature | 25 | 720 | < th | dose dependent | sin | 22 | NA |
| 849 | 315.80 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 876 | 315.86 | wind | 5 | 720 | < th | dose independent | rect. | 11 | 23 |
| 882 | 315.88 | wind | 5 | 720 | > th | dose independent | rect. | 17 | 23 |
| 888 | 315.89 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 897 | 315.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 899 | 315.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 12 |
| 912 | 315.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 13 | 15 |
| 922 | 315.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 936 | 315.99 | wind | 5 | 720 | < th | dose independent | rect. | 7 | 9 |
| 943 | 316.00 | wind | 5 | 720 | > th | dose independent | sin | 21 | NA |
| 957 | 316.02 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 961 | 316.02 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 973 | 316.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 978 | 316.07 | temperature | 15 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 988 | 316.09 | wind | 5 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 991 | 316.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |