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Os03g0760200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0556) R2 : 0.389
β1 : 2.81 (0.325) R2dD : 0.435 R2D : -0.314
β2 : 1.11 (0.106) R2dC : 0.153 R2C : 0.113
β3 : -2.12 (0.205) R2dE : 0.287 R2E : -0.0124
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 8.68 (1.49) R2dD*E : 0.218 R2D*E : -0.425
γ1 : 0.793 (0.114) R2dN8 : 0.134 R2N8 : -0.0675
σ : 0.803
deviance : 297.26
__
_____
C
peak time of C : 14.2
E
wheather : temperature
threshold : 25.33
memory length : 912
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
295.02 0.807 11.9 2.84 1.09 -2.09 0.815 8.88 0.82 14 25.16 929 -- --
317.82 0.83 12.1 1.08 1.11 -1.27 0.361 -- 0.397 13.7 25.13 923 -- --
297.26 0.803 11.9 2.81 1.11 -2.12 -- 8.68 0.793 14.2 25.33 912 -- --
318.03 0.831 12.1 1.13 1.13 -1.24 -- -- 0.387 13.7 25.38 928 -- --
359.23 0.883 11.9 3.13 -- -2.43 -- 8.72 0.968 -- 24.51 1007 -- --
355.43 0.884 12.2 0.8 1.34 -- 0.506 -- 0.3 12.8 -- -- -- --
356.51 0.884 12.2 0.819 1.33 -- -- -- 0.302 12.8 -- -- -- --
388.54 0.918 12.1 1.19 -- -1.38 -- -- 0.467 -- 24.95 1007 -- --
349.02 0.87 12.2 -- 1.16 -0.936 -- -- 0.21 13.4 26.31 945 -- --
467.63 1.01 12.2 0.77 -- -- -- -- 0.278 -- -- -- -- --
374.18 0.905 12.2 -- 1.32 -- -- -- 0.211 12.8 -- -- -- --
422.47 0.957 12.2 -- -- -1.36 -- -- 0.295 -- 24.7 984 -- --
483.26 1.03 12.2 -- -- -- -- -- 0.192 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 291.05 radiation 30 14400 < th dose independent rect. 16 11
3 291.25 radiation 30 14400 < th dose independent rect. 16 9
6 291.75 radiation 30 14400 < th dose independent rect. 16 5
7 291.94 radiation 30 14400 < th dose independent rect. 16 1
15 292.89 wind 1 43200 > th dose independent rect. 7 1
16 293.26 wind 1 43200 < th dose independent rect. 7 1
17 295.43 wind 1 43200 < th dose dependent rect. 6 2
18 295.77 radiation 20 14400 < th dose independent rect. 3 3
20 296.40 temperature 25 720 > th dose dependent sin 17 NA
22 296.83 humidity 90 43200 > th dose independent rect. 5 1
24 296.90 temperature 25 720 > th dose dependent rect. 11 13
40 297.78 radiation 10 1440 < th dose dependent rect. 20 9
48 298.23 radiation 10 14400 > th dose independent rect. 5 1
94 299.72 radiation 1 1440 < th dose independent rect. 3 2
96 299.75 radiation 1 1440 > th dose dependent rect. 18 11
101 299.86 radiation 1 1440 < th dose independent rect. 20 9
106 300.04 radiation 10 4320 < th dose independent rect. 18 9
138 300.96 wind 3 43200 > th dose dependent rect. 13 1
139 300.96 temperature 25 720 > th dose dependent rect. 15 23
140 300.97 radiation 10 4320 < th dose independent rect. 18 7
143 301.05 radiation 10 1440 < th dose dependent rect. 22 7
150 301.21 radiation 10 1440 < th dose dependent rect. 24 5
169 301.48 temperature 25 720 > th dose dependent rect. 5 19
186 301.66 humidity 90 43200 > th dose dependent rect. 5 1
195 301.72 temperature 25 720 > th dose dependent no NA NA
203 301.79 radiation 30 14400 < th dose dependent rect. 20 9
216 302.05 humidity 90 43200 < th dose independent rect. 5 1
219 302.11 radiation 1 1440 > th dose independent rect. 4 1
229 302.11 radiation 1 1440 > th dose dependent rect. 4 1
247 302.24 radiation 1 1440 < th dose independent rect. 22 7
256 302.48 radiation 20 14400 < th dose dependent rect. 24 5
261 302.57 humidity 90 14400 > th dose independent rect. 1 2
262 302.59 wind 5 43200 < th dose independent rect. 11 5
266 302.67 radiation 10 4320 < th dose independent rect. 18 3
267 302.67 radiation 1 1440 < th dose independent rect. 1 4
269 302.71 humidity 90 14400 < th dose independent rect. 24 4
270 302.71 wind 5 43200 > th dose independent rect. 11 5
283 302.83 wind 5 43200 < th dose independent rect. 12 3
287 302.86 radiation 10 4320 < th dose independent rect. 18 1
290 302.94 wind 5 43200 < th dose independent rect. 13 1
291 302.95 wind 5 43200 > th dose independent rect. 12 3
295 303.12 wind 5 43200 > th dose independent rect. 13 1
296 303.13 humidity 90 43200 < th dose independent rect. 19 18
328 303.44 humidity 90 43200 < th dose independent rect. 22 15
334 303.53 humidity 70 720 < th dose dependent rect. 18 13
345 303.66 humidity 70 720 < th dose dependent rect. 18 2
364 303.75 radiation 20 1440 < th dose dependent rect. 3 2
393 303.98 humidity 90 43200 < th dose independent sin 5 NA
408 304.08 humidity 90 43200 < th dose independent rect. 1 11
447 304.37 radiation 20 14400 < th dose independent rect. 1 5
450 304.40 temperature 25 30 < th dose independent rect. 12 14
451 304.40 humidity 90 43200 < th dose independent rect. 9 22
453 304.43 wind 9 43200 < th dose dependent rect. 13 1
465 304.49 wind 3 43200 > th dose dependent rect. 11 5
474 304.63 humidity 90 14400 > th dose independent rect. 24 4
483 304.71 humidity 90 43200 > th dose independent rect. 22 14
498 304.77 radiation 1 14400 < th dose dependent rect. 2 3
503 304.81 humidity 90 43200 > th dose independent rect. 24 12
506 304.84 humidity 90 43200 < th dose independent rect. 11 23
527 304.91 humidity 90 14400 < th dose independent rect. 24 1
531 304.92 radiation 1 14400 < th dose dependent rect. 4 1
535 304.94 humidity 90 43200 > th dose independent rect. 4 3
538 304.94 humidity 90 43200 < th dose independent rect. 22 23
549 305.00 humidity 90 43200 < th dose independent no NA NA
552 305.01 humidity 90 43200 < th dose independent rect. 22 2
596 305.15 humidity 60 720 < th dose independent rect. 18 1
597 305.15 humidity 70 720 < th dose independent rect. 18 13
602 305.18 radiation 1 4320 > th dose dependent rect. 18 1
626 305.23 temperature 25 720 < th dose independent rect. 8 16
631 305.28 humidity 90 43200 > th dose independent sin 6 NA
652 305.43 humidity 90 43200 < th dose independent rect. 5 23
674 305.48 humidity 90 43200 < th dose independent rect. 3 23
738 305.92 humidity 90 43200 < th dose independent rect. 18 8
743 305.94 humidity 90 43200 > th dose dependent rect. 3 6
744 305.94 humidity 90 43200 > th dose dependent rect. 1 11
757 306.00 radiation 10 14400 < th dose independent rect. 20 9
789 306.16 humidity 90 43200 < th dose independent rect. 19 6
830 306.33 humidity 90 43200 > th dose dependent sin 6 NA
832 306.36 atmosphere 1005 43200 > th dose independent rect. 2 1
849 306.44 humidity 90 43200 < th dose independent sin 15 NA
859 306.49 humidity 90 43200 < th dose independent rect. 15 11
872 306.56 humidity 90 43200 > th dose independent rect. 9 22
875 306.57 temperature 20 90 > th dose dependent sin 15 NA
894 306.65 temperature 30 720 > th dose independent rect. 18 1
925 306.72 humidity 90 43200 < th dose independent rect. 11 16
967 306.85 humidity 90 43200 > th dose dependent rect. 19 17