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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0757500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.46 (0.045) R2 : 0.137
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.2 (0.151) R2dE : 0.124 R2E : 0.0868
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.429 (0.0961) R2dN8 : 0.0505 R2N8 : 0.0133
σ : 0.843
deviance : 327.5
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 40
memory length : 1145
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
295.6 0.808 3.43 0.937 0.47 0.902 0.452 3.04 -0.248 22.9 43.4 1224 -- --
306.12 0.815 3.44 0.682 0.441 0.922 0.707 -- -0.334 23.3 40 1188 -- --
295.94 0.801 3.42 0.925 0.439 0.941 -- 3.23 -0.235 23 43.57 1148 -- --
307.96 0.817 3.46 0.6 0.449 0.971 -- -- -0.35 22.8 40.01 1223 -- --
306.6 0.816 3.42 0.919 -- 1.14 -- 3.28 -0.242 -- 42.99 1129 -- --
333.08 0.856 3.43 0.713 0.627 -- 0.827 -- -0.213 23.2 -- -- -- --
335.93 0.858 3.43 0.681 0.626 -- -- -- -0.215 22.9 -- -- -- --
317.95 0.83 3.45 0.62 -- 1.17 -- -- -0.359 -- 40.06 1142 -- --
317.41 0.83 3.47 -- 0.447 1.01 -- -- -0.424 22.8 40 1223 -- --
360.26 0.887 3.41 0.695 -- -- -- -- -0.21 -- -- -- -- --
348.15 0.873 3.45 -- 0.632 -- -- -- -0.291 23 -- -- -- --
327.5 0.843 3.46 -- -- 1.2 -- -- -0.429 -- 40 1145 -- --
372.99 0.901 3.43 -- -- -- -- -- -0.287 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 287.19 temperature 20 43200 < th dose dependent rect. 22 1
8 287.91 radiation 30 43200 < th dose independent rect. 1 6
15 288.21 radiation 30 43200 < th dose independent rect. 4 3
20 288.24 temperature 20 43200 < th dose dependent rect. 14 13
52 288.33 temperature 20 43200 < th dose dependent sin 16 NA
113 288.67 temperature 20 43200 < th dose dependent rect. 2 1
115 288.68 radiation 40 43200 < th dose independent rect. 23 9
129 288.73 radiation 40 43200 < th dose independent rect. 17 15
136 288.77 temperature 20 43200 < th dose dependent rect. 2 22
149 288.82 temperature 20 43200 < th dose dependent no NA NA
153 288.82 temperature 20 43200 < th dose dependent rect. 18 23
165 288.84 radiation 40 43200 < th dose independent rect. 6 2
323 289.23 radiation 1 43200 > th dose dependent rect. 18 1
349 289.30 radiation 10 43200 < th dose dependent rect. 18 11
368 289.39 temperature 20 43200 < th dose dependent sin 1 NA
370 289.40 temperature 20 43200 < th dose independent rect. 7 1
407 289.59 radiation 1 14400 < th dose dependent rect. 24 5
416 289.64 temperature 20 43200 < th dose independent rect. 22 1
419 289.65 radiation 1 43200 < th dose dependent rect. 6 5
435 289.77 radiation 1 43200 > th dose independent rect. 9 1
441 289.80 temperature 20 43200 > th dose independent rect. 7 1
443 289.81 radiation 1 43200 < th dose independent rect. 9 1
461 289.92 temperature 20 43200 > th dose independent rect. 18 1
475 290.02 wind 7 43200 > th dose dependent rect. 11 2
487 290.16 temperature 20 43200 < th dose dependent rect. 7 1
493 290.20 temperature 20 43200 < th dose dependent rect. 6 6
496 290.22 temperature 20 43200 > th dose independent rect. 22 1
502 290.28 radiation 10 43200 < th dose independent rect. 18 2
506 290.30 radiation 10 43200 < th dose independent rect. 18 8
511 290.32 radiation 20 43200 > th dose dependent rect. 16 15
519 290.39 radiation 1 14400 < th dose dependent rect. 4 1
531 290.46 temperature 20 43200 < th dose independent rect. 13 2
534 290.48 radiation 10 43200 < th dose independent rect. 18 12
535 290.49 temperature 20 43200 < th dose independent rect. 12 4
536 290.50 temperature 20 43200 > th dose independent rect. 13 2
540 290.50 radiation 40 43200 < th dose dependent rect. 23 6
555 290.60 radiation 40 43200 < th dose dependent rect. 4 1
560 290.65 temperature 20 43200 < th dose independent rect. 18 1
562 290.65 temperature 20 43200 < th dose independent rect. 11 9
574 290.70 radiation 30 43200 < th dose independent rect. 16 10
575 290.70 temperature 20 43200 < th dose independent rect. 10 11
578 290.71 wind 7 43200 > th dose independent rect. 11 2
585 290.72 radiation 30 43200 < th dose independent rect. 16 4
587 290.73 radiation 30 43200 < th dose independent rect. 16 1
593 290.76 temperature 20 43200 < th dose independent rect. 1 1
599 290.78 radiation 40 43200 < th dose dependent rect. 18 8
602 290.79 temperature 20 43200 < th dose independent rect. 7 16
620 290.83 radiation 1 43200 < th dose independent rect. 8 5
622 290.83 temperature 20 43200 < th dose independent rect. 9 14
625 290.83 radiation 40 4320 < th dose dependent rect. 18 8
636 290.87 temperature 20 43200 < th dose independent rect. 7 14
642 290.90 radiation 10 43200 < th dose independent rect. 5 1
648 290.91 radiation 10 43200 < th dose independent rect. 1 5
669 290.97 temperature 20 43200 < th dose independent rect. 18 6
672 290.98 radiation 10 43200 < th dose independent rect. 23 7
707 291.10 temperature 20 43200 > th dose independent rect. 11 9
716 291.12 temperature 20 43200 > th dose independent rect. 21 6
733 291.17 temperature 20 43200 < th dose independent rect. 7 9
737 291.18 temperature 20 43200 > th dose independent rect. 2 1
762 291.25 temperature 20 43200 < th dose independent sin 21 NA
763 291.26 wind 7 43200 < th dose independent rect. 11 2
791 291.32 radiation 10 43200 < th dose dependent rect. 18 2
793 291.33 temperature 20 43200 > th dose independent rect. 7 13
808 291.35 temperature 20 43200 > th dose independent rect. 7 9
821 291.36 temperature 20 43200 > th dose independent rect. 7 16
902 291.54 temperature 20 43200 > th dose independent rect. 9 14
921 291.58 temperature 20 43200 > th dose independent rect. 21 10
929 291.58 radiation 30 43200 > th dose dependent rect. 7 1
955 291.60 temperature 20 43200 < th dose dependent rect. 9 2
958 291.61 humidity 90 43200 < th dose independent rect. 24 1
985 291.65 wind 1 43200 > th dose independent rect. 16 3