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Os03g0757100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.5 (0.0455) R2 : 0.711
β1 : 1.45 (0.168) R2dD : 0.0495 R2D : 0.02
β2 : 2.46 (0.119) R2dC : 0.284 R2C : 0.0973
β3 : -2.12 (0.094) R2dE : 0.354 R2E : 0.192
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.35 (0.0978) R2dN8 : 0.167 R2N8 : 0.196
σ : 0.849
deviance : 332.11
__
_____
C
peak time of C : 4.3
E
wheather : temperature
threshold : 19.44
memory length : 241
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 13.4
open length of G : 16

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
328.68 0.852 9.5 1.4 2.46 -2.06 -1.16 -0.0941 -1.36 4.43 19.6 245 13.3 16.2
328.66 0.844 9.5 1.42 2.46 -2.07 -1.11 -- -1.36 4.39 19.53 244 13.4 16.1
331.98 0.849 9.51 1.42 2.46 -2.1 -- -0.123 -1.37 4.33 19.49 241 13.4 16.1
332.11 0.849 9.5 1.45 2.46 -2.12 -- -- -1.35 4.3 19.44 241 13.4 16
533.76 1.08 9.5 1.61 -- -1.81 -- 0.991 -1.3 -- 21 84 13.4 15.9
479.81 1.03 9.52 0.893 2.78 -- -0.289 -- -1.66 7.2 -- -- -- --
480.03 1.03 9.52 0.888 2.78 -- -- -- -1.66 7.22 -- -- -- --
430.6 0.966 9.52 1.52 -- -3.24 -- -- -1.17 -- 21.6 619 7.32 15.2
383.52 0.912 9.54 -- 2.4 -1.78 -- -- -1.54 4.83 19.6 238 13.2 16.4
889.6 1.39 9.59 0.938 -- -- -- -- -1.61 -- -- -- -- --
500.8 1.05 9.55 -- 2.79 -- -- -- -1.76 7.2 -- -- -- --
433.84 0.97 9.65 -- -- -2.85 -- -- -1.7 -- 22.3 399 11.4 9.05
912.81 1.41 9.61 -- -- -- -- -- -1.71 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 332.89 temperature 20.0 270 > th dose independent rect. 13 16
5 341.15 temperature 20.0 270 > th dose independent rect. 23 20
13 346.07 wind 1.0 43200 > th dose independent rect. 9 2
19 350.09 temperature 20.0 270 > th dose independent rect. 11 8
20 350.34 temperature 20.0 10 > th dose independent rect. 15 15
26 352.58 wind 1.0 43200 < th dose dependent rect. 9 2
30 353.10 radiation 1.0 270 < th dose dependent rect. 5 20
34 354.10 wind 1.0 43200 < th dose independent rect. 9 2
40 355.85 temperature 10.0 270 > th dose dependent rect. 23 8
41 356.00 humidity 60.0 270 > th dose dependent rect. 23 8
43 356.50 radiation 1.0 270 < th dose dependent rect. 15 9
48 356.74 temperature 10.0 43200 > th dose independent rect. 9 7
53 357.56 temperature 20.0 10 > th dose independent rect. 1 20
58 357.80 wind 1.0 270 > th dose independent rect. 4 10
63 358.03 temperature 10.0 270 > th dose dependent rect. 14 15
64 358.13 radiation 20.0 14400 < th dose independent rect. 3 3
81 359.10 atmosphere 995.0 270 > th dose independent rect. 14 15
89 359.89 humidity 70.0 90 > th dose dependent rect. 1 8
92 360.04 temperature 10.0 270 > th dose independent rect. 5 9
93 360.04 atmosphere 995.0 270 > th dose independent rect. 5 9
94 360.04 atmosphere 1015.0 270 < th dose independent rect. 5 9
95 360.04 precipitation 0.1 270 < th dose independent rect. 5 9
96 360.04 temperature 10.0 270 > th dose independent rect. 14 15
97 360.04 precipitation 0.1 270 < th dose dependent rect. 5 9
101 360.34 wind 7.0 270 < th dose independent rect. 7 16
106 360.78 wind 7.0 270 < th dose independent rect. 6 18
107 360.82 wind 7.0 270 < th dose independent rect. 18 6
112 360.98 wind 9.0 270 < th dose independent rect. 5 9
114 361.01 wind 1.0 43200 < th dose dependent rect. 11 1
127 361.55 wind 1.0 43200 > th dose independent rect. 14 1
129 361.75 radiation 40.0 270 < th dose independent rect. 13 16
134 362.05 atmosphere 995.0 270 > th dose independent rect. 24 18
152 363.13 temperature 20.0 270 > th dose independent rect. 23 7
164 363.89 radiation 1.0 270 < th dose dependent sin 17 NA
166 364.03 temperature 10.0 270 > th dose dependent rect. 23 20
168 364.07 wind 3.0 43200 > th dose independent rect. 12 2
169 364.21 wind 3.0 43200 < th dose independent rect. 9 6
181 364.53 radiation 1.0 270 < th dose independent rect. 16 8
185 364.63 wind 3.0 43200 > th dose independent rect. 10 5
190 364.69 radiation 1.0 270 < th dose independent rect. 8 16
201 365.05 radiation 20.0 90 < th dose dependent rect. 1 18
205 365.19 precipitation 0.1 270 < th dose independent rect. 14 15
206 365.19 precipitation 0.1 270 < th dose dependent rect. 14 15
211 365.42 humidity 50.0 270 > th dose independent rect. 5 8
219 365.58 radiation 1.0 270 < th dose independent rect. 5 20
225 365.72 wind 1.0 43200 < th dose dependent rect. 14 1
244 366.33 wind 5.0 43200 < th dose dependent rect. 13 1
245 366.43 wind 3.0 43200 < th dose independent rect. 13 1
252 366.58 radiation 1.0 14400 < th dose dependent rect. 4 1
257 366.71 temperature 10.0 270 > th dose independent rect. 18 6
258 366.71 humidity 50.0 270 > th dose independent rect. 18 6
259 366.71 radiation 20.0 270 < th dose independent rect. 18 6
265 366.72 radiation 40.0 270 < th dose dependent rect. 18 6
266 366.73 atmosphere 1015.0 270 < th dose independent rect. 24 18
267 366.73 radiation 20.0 270 < th dose dependent rect. 18 6
285 367.16 radiation 30.0 270 < th dose dependent rect. 23 9
290 367.20 wind 9.0 270 < th dose dependent rect. 24 6
301 367.40 precipitation 0.1 270 < th dose independent rect. 18 6
303 367.40 precipitation 0.1 270 < th dose dependent rect. 18 6
310 367.46 wind 7.0 270 < th dose independent rect. 19 4
312 367.48 wind 9.0 270 < th dose dependent rect. 23 8
325 367.81 humidity 80.0 270 > th dose independent rect. 24 6
345 367.94 wind 1.0 43200 > th dose dependent rect. 13 1
347 367.97 atmosphere 995.0 270 > th dose independent rect. 18 6
349 367.99 wind 1.0 43200 > th dose independent rect. 24 1
351 368.02 wind 9.0 270 < th dose dependent rect. 18 6
355 368.06 wind 1.0 43200 > th dose dependent rect. 9 8
356 368.06 wind 1.0 43200 < th dose dependent rect. 8 18
364 368.22 precipitation 0.1 270 < th dose independent rect. 24 18
365 368.22 precipitation 0.1 270 < th dose dependent rect. 24 18
368 368.31 wind 7.0 270 < th dose independent rect. 5 20
371 368.33 radiation 1.0 14400 > th dose independent rect. 18 11
376 368.42 wind 1.0 43200 > th dose dependent rect. 13 3
380 368.50 wind 9.0 270 < th dose independent rect. 14 15
385 368.54 wind 5.0 43200 < th dose dependent rect. 9 13
441 369.17 radiation 20.0 10 < th dose dependent rect. 2 18
452 369.24 atmosphere 995.0 270 > th dose independent rect. 23 20
471 369.45 radiation 40.0 10 < th dose dependent rect. 2 18
473 369.48 wind 3.0 43200 > th dose independent rect. 19 2
478 369.54 wind 3.0 43200 < th dose independent rect. 19 2
494 369.65 radiation 1.0 14400 > th dose independent rect. 18 1
504 369.65 wind 3.0 43200 > th dose independent rect. 9 13
519 369.74 temperature 30.0 270 < th dose independent rect. 18 6
524 369.83 wind 1.0 43200 > th dose dependent rect. 9 11
533 369.91 radiation 1.0 14400 < th dose independent rect. 18 11
538 369.97 wind 9.0 270 < th dose dependent rect. 19 4
544 370.02 precipitation 0.1 270 < th dose independent rect. 23 8
545 370.02 precipitation 0.1 270 < th dose dependent rect. 23 8
558 370.12 wind 3.0 43200 < th dose independent rect. 9 13
562 370.18 radiation 40.0 14400 < th dose independent rect. 15 1
590 370.56 radiation 10.0 270 < th dose independent rect. 24 6
592 370.59 precipitation 0.1 270 < th dose independent rect. 24 6
593 370.59 precipitation 0.1 270 < th dose dependent rect. 24 6
605 370.67 wind 7.0 43200 < th dose dependent sin 21 NA
628 370.86 radiation 20.0 270 < th dose independent rect. 23 8
671 371.20 temperature 30.0 270 < th dose independent rect. 23 8
672 371.20 humidity 50.0 270 > th dose independent rect. 23 8
674 371.20 atmosphere 995.0 270 > th dose independent rect. 23 8
676 371.20 temperature 10.0 270 > th dose independent rect. 7 16
686 371.27 wind 9.0 270 < th dose independent rect. 23 8
692 371.29 wind 1.0 43200 > th dose dependent sin 21 NA
713 371.43 humidity 80.0 43200 > th dose independent rect. 20 4
726 371.50 radiation 10.0 14400 > th dose independent rect. 5 1
732 371.50 temperature 30.0 270 < th dose independent rect. 24 6
733 371.50 humidity 50.0 270 > th dose independent rect. 24 6
736 371.50 atmosphere 995.0 270 > th dose independent rect. 24 6
747 371.50 temperature 10.0 270 > th dose independent rect. 6 18
752 371.51 atmosphere 1015.0 270 < th dose independent rect. 24 6
758 371.56 wind 9.0 270 < th dose independent rect. 24 6
771 371.64 wind 1.0 270 > th dose dependent rect. 12 7
816 371.90 precipitation 0.1 270 < th dose independent rect. 6 18
818 371.90 precipitation 0.1 270 < th dose dependent rect. 6 18
825 371.94 wind 1.0 43200 < th dose dependent rect. 10 16
828 371.95 precipitation 0.1 270 < th dose independent rect. 7 16
829 371.95 precipitation 0.1 270 < th dose dependent rect. 7 16
846 372.09 radiation 40.0 14400 < th dose independent rect. 15 11
853 372.14 wind 3.0 270 < th dose independent rect. 24 6
855 372.14 radiation 10.0 90 < th dose independent rect. 1 18
881 372.23 radiation 20.0 14400 < th dose independent rect. 18 12
895 372.29 wind 1.0 43200 > th dose dependent rect. 9 16
944 372.47 wind 1.0 43200 > th dose dependent rect. 12 12
996 372.71 wind 3.0 43200 > th dose independent sin 22 NA
998 372.72 atmosphere 995.0 270 > th dose independent rect. 11 8
999 372.72 humidity 80.0 43200 < th dose independent rect. 20 10