Os03g0756300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : X8 domain containing protein.
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Os03g0756300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : X8 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212.56 | 0.685 | 8.42 | -0.388 | 1.53 | 1.61 | 0.707 | -3.61 | 0.388 | 0.206 | 29.47 | 1402 | -- | -- |
| 210.94 | 0.676 | 8.39 | 0.195 | 1.47 | 1.39 | 0.535 | -- | 0.161 | 0.289 | 26.5 | 2664 | -- | -- |
| 214.25 | 0.682 | 8.44 | -0.429 | 1.5 | 1.64 | -- | -3.21 | 0.27 | 0.248 | 28.57 | 1279 | -- | -- |
| 212.76 | 0.679 | 8.39 | 0.178 | 1.47 | 1.39 | -- | -- | 0.159 | 0.269 | 26.5 | 2663 | -- | -- |
| 316.6 | 0.829 | 8.44 | -0.169 | -- | 2.24 | -- | -1.12 | -0.0597 | -- | 24.87 | 1018 | -- | -- |
| 287.21 | 0.795 | 8.39 | 0.656 | 1.67 | -- | 0.896 | -- | 0.191 | 0.331 | -- | -- | -- | -- |
| 290.67 | 0.798 | 8.39 | 0.621 | 1.67 | -- | -- | -- | 0.186 | 0.355 | -- | -- | -- | -- |
| 316.92 | 0.829 | 8.41 | 0.0786 | -- | 2.16 | -- | -- | -0.00221 | -- | 24.88 | 1019 | -- | -- |
| 213.53 | 0.681 | 8.4 | -- | 1.47 | 1.43 | -- | -- | 0.138 | 0.278 | 26.47 | 2664 | -- | -- |
| 465.59 | 1.01 | 8.36 | 0.677 | -- | -- | -- | -- | 0.213 | -- | -- | -- | -- | -- |
| 300.84 | 0.811 | 8.41 | -- | 1.68 | -- | -- | -- | 0.117 | 0.375 | -- | -- | -- | -- |
| 317.07 | 0.829 | 8.41 | -- | -- | 2.18 | -- | -- | -0.0151 | -- | 24.85 | 1019 | -- | -- |
| 477.69 | 1.02 | 8.37 | -- | -- | -- | -- | -- | 0.138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.84 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 6 | 199.21 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 7 | 199.25 | wind | 3.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 10 | 199.56 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 13 | 199.68 | wind | 7.0 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 15 | 199.73 | wind | 7.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 17 | 199.78 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 33 | 200.12 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 34 | 200.13 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 42 | 200.30 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 57 | 200.59 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 15 |
| 64 | 200.77 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 67 | 200.96 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 75 | 201.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 105 | 201.88 | wind | 7.0 | 43200 | > th | dose independent | sin | 6 | NA |
| 115 | 202.08 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 119 | 202.12 | wind | 7.0 | 43200 | < th | dose independent | sin | 6 | NA |
| 136 | 202.51 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 149 | 202.79 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 151 | 202.80 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 10 |
| 213 | 203.98 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 255 | 204.58 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 304 | 205.21 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 336 | 205.66 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 355 | 205.88 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 417 | 206.57 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 428 | 206.65 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 522 | 207.52 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 551 | 207.81 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 590 | 208.17 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 21 | 15 |
| 646 | 208.70 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 660 | 208.95 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 674 | 209.16 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 681 | 209.22 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 698 | 209.36 | wind | 9.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 714 | 209.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 716 | 209.58 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 761 | 209.93 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 765 | 209.97 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 766 | 209.97 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 776 | 210.04 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 792 | 210.16 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 825 | 210.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 836 | 210.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 838 | 210.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 928 | 210.97 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 934 | 211.01 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 935 | 211.02 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 939 | 211.03 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 5 |