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Os03g0756200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.89 (0.0307) R2 : 0.000287
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0234 (0.0646) R2dN8 : 0.000371 R2N8 : 0.000287
σ : 0.578
deviance : 153.09
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
119.83 0.514 6.81 0.812 0.369 0.46 -0.328 -0.389 0.288 7.09 24.18 99 -- --
120.67 0.512 6.81 0.718 0.369 0.442 -0.341 -- 0.266 6.87 24.1 123 -- --
120.09 0.51 6.8 0.82 0.363 0.465 -- -0.419 0.292 7.22 24.2 107 -- --
120.88 0.512 6.82 0.674 0.366 0.445 -- -- 0.248 7.18 24.2 98 -- --
124.33 0.519 6.8 0.869 -- 0.559 -- -0.606 0.378 -- 24.6 207 -- --
132.89 0.54 6.87 0.518 0.487 -- -0.505 -- 0.0219 5.75 -- -- -- --
133.5 0.541 6.87 0.515 0.485 -- -- -- 0.0242 5.87 -- -- -- --
125.57 0.522 6.82 0.68 -- 0.517 -- -- 0.299 -- 24.76 218 -- --
132.41 0.536 6.84 -- 0.364 0.367 -- -- 0.157 7.28 24.26 104 -- --
145.68 0.564 6.88 0.53 -- -- -- -- 0.0355 -- -- -- -- --
140.51 0.554 6.88 -- 0.493 -- -- -- -0.0332 5.82 -- -- -- --
137.34 0.546 6.84 -- -- 0.448 -- -- 0.192 -- 24.8 194 -- --
153.09 0.578 6.89 -- -- -- -- -- -0.0234 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 108.15 temperature 25.0 270 > th dose dependent rect. 22 9
3 110.73 temperature 25.0 270 < th dose independent rect. 12 18
10 111.63 temperature 25.0 270 > th dose independent rect. 21 11
24 113.28 temperature 25.0 270 < th dose independent rect. 21 9
28 113.44 temperature 25.0 270 > th dose independent sin 11 NA
41 114.29 temperature 25.0 270 < th dose independent sin 11 NA
55 115.04 temperature 25.0 270 > th dose independent rect. 23 1
59 115.25 temperature 25.0 270 > th dose dependent rect. 23 1
63 115.36 temperature 25.0 270 > th dose dependent rect. 22 3
66 115.45 temperature 10.0 90 > th dose dependent rect. 17 10
76 115.93 temperature 30.0 90 < th dose dependent rect. 14 17
95 116.31 temperature 10.0 90 > th dose dependent rect. 6 21
104 116.62 humidity 50.0 90 > th dose independent rect. 3 14
132 117.28 radiation 1.0 720 > th dose independent rect. 15 3
148 117.52 precipitation 0.1 14400 < th dose independent rect. 5 1
149 117.52 precipitation 0.1 14400 < th dose dependent rect. 5 1
151 117.54 precipitation 0.1 14400 > th dose independent rect. 5 1
153 117.55 precipitation 0.1 14400 > th dose dependent rect. 4 4
157 117.60 precipitation 0.1 14400 > th dose dependent rect. 5 1
160 117.62 humidity 50.0 90 > th dose dependent rect. 3 14
168 117.68 precipitation 0.1 14400 < th dose independent rect. 4 4
170 117.68 precipitation 0.1 14400 < th dose dependent rect. 4 4
176 117.77 precipitation 0.1 14400 > th dose independent rect. 4 4
191 118.00 temperature 25.0 720 > th dose independent rect. 15 11
211 118.28 precipitation 0.1 90 < th dose independent rect. 17 10
212 118.28 precipitation 0.1 90 < th dose dependent rect. 17 10
263 118.68 temperature 10.0 90 > th dose independent rect. 17 10
264 118.68 atmosphere 995.0 90 > th dose independent rect. 17 10
265 118.68 radiation 20.0 90 < th dose independent rect. 17 10
269 118.68 temperature 10.0 90 > th dose independent rect. 3 14
270 118.68 atmosphere 1015.0 90 < th dose independent rect. 3 14
282 118.74 temperature 25.0 90 > th dose dependent rect. 1 1
286 118.75 temperature 10.0 90 > th dose dependent rect. 8 19
288 118.76 wind 1.0 14400 > th dose dependent rect. 1 1
291 118.78 precipitation 0.1 90 < th dose independent rect. 3 14
294 118.78 precipitation 0.1 90 < th dose dependent rect. 3 14
298 118.80 wind 9.0 90 < th dose independent rect. 17 10
300 118.81 temperature 25.0 720 > th dose independent rect. 15 3
308 118.85 humidity 50.0 30 > th dose dependent rect. 3 23
316 118.93 wind 1.0 30 < th dose independent rect. 2 1
329 119.00 wind 1.0 10 > th dose independent rect. 12 18
335 119.05 radiation 40.0 90 < th dose dependent rect. 17 10
348 119.13 wind 9.0 90 < th dose dependent rect. 17 10
365 119.22 wind 1.0 10 > th dose independent rect. 14 16
367 119.23 wind 3.0 30 < th dose dependent rect. 2 1
373 119.25 wind 1.0 14400 > th dose dependent rect. 23 4
380 119.30 temperature 15.0 10 > th dose dependent rect. 22 14
400 119.41 precipitation 0.1 14400 > th dose dependent rect. 4 10
411 119.44 atmosphere 1005.0 30 > th dose dependent rect. 2 1
416 119.46 atmosphere 1005.0 30 > th dose independent rect. 2 1
418 119.47 humidity 80.0 30 > th dose independent rect. 2 1
423 119.49 atmosphere 995.0 90 > th dose independent rect. 3 14
438 119.53 wind 1.0 90 > th dose independent rect. 4 2
441 119.54 temperature 20.0 30 > th dose independent rect. 2 1
447 119.58 temperature 25.0 90 < th dose independent rect. 4 3
450 119.58 temperature 25.0 90 < th dose dependent rect. 24 23
455 119.60 temperature 30.0 270 < th dose dependent rect. 1 5
461 119.63 temperature 25.0 30 < th dose independent rect. 2 1
466 119.64 humidity 50.0 90 > th dose independent rect. 17 10
471 119.65 wind 5.0 30 < th dose independent rect. 2 1
474 119.65 temperature 10.0 30 > th dose independent rect. 2 1
477 119.65 humidity 50.0 30 > th dose independent rect. 2 1
480 119.65 atmosphere 995.0 30 > th dose independent rect. 2 1
482 119.65 atmosphere 1010.0 30 < th dose independent rect. 2 1
484 119.65 radiation 1.0 30 < th dose independent rect. 2 1
489 119.65 precipitation 0.1 30 < th dose independent rect. 2 1
490 119.65 temperature 10.0 30 > th dose independent rect. 3 23
491 119.65 radiation 1.0 30 < th dose dependent rect. 2 1
496 119.65 precipitation 0.1 30 < th dose dependent rect. 2 1
499 119.66 humidity 50.0 30 > th dose dependent rect. 2 1
504 119.67 temperature 10.0 720 > th dose dependent rect. 15 3
507 119.68 precipitation 0.1 14400 < th dose independent rect. 4 10
508 119.68 precipitation 0.1 14400 < th dose dependent rect. 4 10
509 119.69 humidity 80.0 1440 < th dose independent rect. 8 5
511 119.69 wind 7.0 14400 < th dose dependent rect. 1 2
512 119.70 radiation 1.0 270 > th dose independent rect. 15 23
517 119.71 wind 9.0 90 < th dose dependent rect. 6 22
521 119.73 wind 1.0 14400 > th dose dependent rect. 22 6
522 119.73 temperature 30.0 270 < th dose dependent rect. 21 9
534 119.78 precipitation 0.1 14400 > th dose independent rect. 4 10
538 119.80 temperature 30.0 90 < th dose dependent rect. 3 4
560 119.85 atmosphere 1005.0 90 > th dose dependent rect. 24 3
572 119.89 radiation 1.0 720 < th dose independent rect. 8 15
573 119.90 atmosphere 1015.0 30 < th dose dependent rect. 2 1
578 119.93 wind 9.0 90 < th dose independent rect. 3 14
583 119.94 wind 5.0 90 < th dose independent rect. 6 22
585 119.95 wind 9.0 14400 < th dose dependent rect. 23 4
586 119.95 radiation 1.0 270 < th dose dependent rect. 3 13
588 119.96 atmosphere 995.0 30 > th dose independent rect. 3 23
605 120.01 wind 3.0 14400 < th dose independent rect. 23 3
614 120.05 temperature 25.0 270 < th dose independent rect. 1 5
620 120.06 temperature 15.0 90 > th dose independent rect. 6 21
627 120.08 temperature 15.0 10 > th dose dependent rect. 24 12
630 120.10 precipitation 0.1 14400 > th dose independent rect. 17 1
631 120.10 wind 3.0 14400 > th dose independent rect. 23 3
650 120.15 radiation 1.0 720 < th dose independent rect. 15 8
657 120.17 atmosphere 1010.0 10 < th dose independent rect. 6 22
658 120.17 temperature 10.0 270 > th dose dependent rect. 21 13
671 120.21 temperature 30.0 30 < th dose dependent rect. 2 1
692 120.26 wind 5.0 90 < th dose independent rect. 9 18
699 120.29 radiation 1.0 4320 < th dose dependent rect. 3 1
701 120.29 wind 7.0 90 < th dose dependent rect. 9 18
708 120.31 radiation 1.0 720 < th dose independent rect. 17 6
713 120.32 wind 3.0 14400 < th dose independent rect. 1 1
717 120.33 radiation 1.0 720 > th dose independent rect. 7 11
731 120.36 wind 9.0 1440 < th dose independent rect. 3 1
732 120.36 temperature 10.0 1440 > th dose independent rect. 3 1
735 120.36 temperature 30.0 1440 < th dose independent rect. 3 1
739 120.36 humidity 50.0 1440 > th dose independent rect. 3 1
748 120.36 atmosphere 995.0 1440 > th dose independent rect. 3 1
749 120.36 radiation 1.0 1440 < th dose independent rect. 3 1
771 120.36 temperature 10.0 1440 > th dose independent rect. 4 23
784 120.36 radiation 1.0 720 < th dose dependent rect. 8 15
785 120.37 atmosphere 1015.0 90 < th dose independent rect. 17 10
786 120.37 temperature 30.0 270 < th dose dependent rect. 3 2
791 120.38 radiation 30.0 43200 < th dose dependent rect. 3 1
819 120.45 radiation 1.0 90 < th dose independent rect. 4 13
825 120.46 precipitation 0.1 4320 > th dose independent rect. 7 1
829 120.46 precipitation 0.1 4320 > th dose dependent rect. 7 1
843 120.50 humidity 80.0 1440 > th dose independent rect. 8 5
854 120.52 radiation 40.0 1440 < th dose dependent rect. 19 10
863 120.54 humidity 80.0 1440 < th dose independent rect. 11 1
866 120.54 temperature 25.0 90 < th dose independent rect. 3 23
879 120.56 radiation 1.0 720 < th dose dependent rect. 17 6
892 120.58 temperature 20.0 90 > th dose dependent sin 9 NA
944 120.68 temperature 25.0 90 > th dose independent rect. 17 21
946 120.68 humidity 90.0 4320 > th dose dependent rect. 8 1
996 120.76 wind 9.0 4320 < th dose independent rect. 5 2