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Os03g0755100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Transporter associated with antigen processing-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0131) R2 : 0.61
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.45 (0.0542) R2dE : 0.689 R2E : 0.518
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.25 (0.0289) R2dN8 : 0.0924 R2N8 : -0.0781
σ : 0.243
deviance : 27.25
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C
peak time of C : --
E
wheather : temperature
threshold : 27.96
memory length : 109
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.99 0.24 12.3 -0.0821 0.247 1.42 -0.0826 0.722 0.212 1.42 25.66 226 -- --
26.59 0.24 12.2 0.0385 0.219 1.37 0.0723 -- 0.239 1.63 26.04 191 -- --
26.02 0.238 12.3 -0.0719 0.249 1.41 -- 0.672 0.213 1.47 25.68 226 -- --
26.61 0.24 12.2 0.0347 0.218 1.36 -- -- 0.239 1.51 26.08 191 -- --
27.2 0.243 12.2 0.00646 -- 1.56 -- 0.357 0.285 -- 27.52 140 -- --
53.68 0.343 12.3 -0.31 0.488 -- 0.181 -- -0.0544 2.68 -- -- -- --
53.79 0.343 12.3 -0.314 0.488 -- -- -- -0.0554 2.64 -- -- -- --
27.17 0.243 12.2 0.0697 -- 1.48 -- -- 0.27 -- 27.92 110 -- --
26.64 0.24 12.3 -- 0.214 1.35 -- -- 0.236 1.46 26.14 191 -- --
67.68 0.384 12.3 -0.293 -- -- -- -- -0.0431 -- -- -- -- --
56.39 0.351 12.3 -- 0.482 -- -- -- -0.0204 2.64 -- -- -- --
27.25 0.243 12.2 -- -- 1.45 -- -- 0.25 -- 27.96 109 -- --
69.95 0.39 12.3 -- -- -- -- -- -0.0105 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.91 temperature 25 270 < th dose dependent rect. 24 22
15 25.80 temperature 10 270 > th dose dependent sin 8 NA
20 26.20 temperature 30 270 < th dose dependent sin 8 NA
24 26.37 temperature 25 270 < th dose dependent no NA NA
25 26.39 temperature 25 270 < th dose dependent rect. 13 23
28 26.51 temperature 25 270 < th dose dependent rect. 11 23
82 27.57 temperature 10 270 > th dose dependent rect. 15 23
91 27.67 temperature 30 10 < th dose dependent rect. 14 22
94 27.71 temperature 30 30 < th dose dependent rect. 9 23
133 28.17 temperature 30 10 < th dose dependent rect. 1 23
168 28.43 temperature 15 90 > th dose dependent rect. 6 23
199 28.78 temperature 10 270 > th dose dependent rect. 4 23
202 28.84 temperature 25 720 < th dose dependent rect. 5 21
211 28.91 temperature 30 10 < th dose dependent rect. 3 23
234 29.08 temperature 10 10 > th dose dependent no NA NA
235 29.08 temperature 10 90 > th dose dependent no NA NA
417 29.98 temperature 15 270 > th dose dependent rect. 21 13
550 30.54 temperature 25 1440 < th dose dependent rect. 16 7
561 30.58 temperature 25 1440 < th dose dependent rect. 17 5
606 30.74 temperature 25 1440 < th dose dependent sin 17 NA
665 30.93 temperature 25 720 < th dose dependent sin 14 NA
699 31.04 temperature 20 270 > th dose independent rect. 4 23
755 31.17 temperature 15 10 > th dose dependent rect. 23 23
773 31.25 temperature 20 270 < th dose independent rect. 24 22
797 31.31 temperature 15 10 > th dose dependent rect. 17 23
915 31.57 temperature 15 90 > th dose dependent rect. 8 23
959 31.69 temperature 15 10 > th dose dependent rect. 21 23
983 31.76 temperature 15 90 > th dose dependent rect. 21 23
995 31.79 temperature 15 10 > th dose dependent rect. 8 23