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Os03g0754800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Mitochondrial substrate carrier family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.8 (0.0156) R2 : 0.0107
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0726 (0.0328) R2dN8 : 0.0138 R2N8 : 0.0107
σ : 0.293
deviance : 39.44
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.43 0.223 10.9 -0.931 0.142 0.164 0.00188 1.28 -0.185 18.3 25.05 932 -- --
24.35 0.232 10.8 -0.765 0.0892 -0.143 -0.437 -- -0.172 21.3 48.52 1054 -- --
22.43 0.221 10.9 -0.931 0.141 0.164 -- 1.28 -0.186 18.3 25.04 939 -- --
24.57 0.231 10.8 -0.698 0.142 0.0749 -- -- -0.137 18.2 35 980 -- --
23.46 0.226 10.9 -0.938 -- 0.157 -- 1.28 -0.191 -- 24.9 982 -- --
24.6 0.233 10.8 -0.731 0.112 -- -0.352 -- -0.151 20 -- -- -- --
24.65 0.232 10.8 -0.719 0.139 -- -- -- -0.15 17.9 -- -- -- --
24.98 0.233 10.8 -0.452 -- 0.259 -- -- -0.0451 -- 35.95 47520 -- --
25.4 0.235 10.8 -- 0.137 0.577 -- -- 0.103 18.2 48.08 47520 -- --
25.65 0.237 10.8 -0.723 -- -- -- -- -0.153 -- -- -- -- --
38.26 0.289 10.8 -- 0.151 -- -- -- -0.0696 17.6 -- -- -- --
26.37 0.239 10.8 -- -- 0.581 -- -- 0.101 -- 64.19 47520 -- --
39.44 0.293 10.8 -- -- -- -- -- -0.0726 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.16 humidity 90.0 14400 > th dose independent rect. 23 7
4 21.26 humidity 90.0 14400 > th dose independent rect. 24 4
6 21.27 humidity 90.0 14400 > th dose dependent rect. 4 2
7 21.27 radiation 1.0 4320 < th dose dependent rect. 3 2
14 21.39 radiation 1.0 4320 < th dose dependent rect. 23 6
16 21.41 humidity 90.0 14400 < th dose independent rect. 23 5
17 21.42 humidity 90.0 14400 < th dose independent rect. 24 1
20 21.42 humidity 90.0 14400 > th dose dependent rect. 24 6
21 21.43 wind 1.0 14400 < th dose independent rect. 2 2
29 21.47 radiation 1.0 4320 < th dose dependent rect. 20 9
31 21.48 humidity 90.0 14400 > th dose dependent rect. 1 1
35 21.49 wind 1.0 14400 < th dose dependent rect. 2 2
39 21.51 wind 1.0 14400 > th dose independent rect. 2 2
46 21.54 radiation 1.0 4320 > th dose independent rect. 18 11
47 21.55 radiation 1.0 4320 > th dose independent rect. 18 1
58 21.56 wind 9.0 90 < th dose independent sin 14 NA
70 21.65 wind 1.0 43200 > th dose independent rect. 2 6
91 21.73 wind 1.0 43200 < th dose independent rect. 2 7
118 21.81 wind 1.0 43200 < th dose dependent rect. 2 6
120 21.83 wind 1.0 43200 > th dose independent rect. 5 2
121 21.83 wind 1.0 43200 < th dose independent rect. 5 3
135 21.89 humidity 90.0 14400 > th dose independent rect. 5 1
151 21.91 wind 1.0 43200 < th dose dependent rect. 5 2
153 21.92 humidity 90.0 43200 < th dose independent rect. 5 2
172 21.96 radiation 1.0 4320 < th dose independent rect. 18 11
180 21.99 radiation 1.0 4320 < th dose independent rect. 18 1
189 22.00 radiation 1.0 4320 < th dose independent rect. 18 7
195 22.01 wind 9.0 90 > th dose independent sin 13 NA
200 22.01 wind 7.0 90 > th dose dependent rect. 13 16
205 22.02 wind 7.0 90 > th dose dependent rect. 15 14
231 22.05 temperature 15.0 30 > th dose dependent rect. 12 10
234 22.05 wind 7.0 270 > th dose dependent rect. 12 22
244 22.07 temperature 20.0 720 < th dose independent rect. 5 1
246 22.07 wind 9.0 90 > th dose dependent sin 13 NA
264 22.09 wind 9.0 90 > th dose independent rect. 15 11
272 22.09 humidity 50.0 14400 > th dose dependent rect. 1 2
291 22.11 wind 9.0 90 > th dose independent rect. 13 13
340 22.13 temperature 15.0 30 > th dose dependent rect. 12 17
341 22.13 wind 3.0 90 > th dose dependent rect. 12 18
350 22.14 wind 3.0 90 > th dose dependent rect. 12 21
352 22.15 wind 9.0 90 > th dose independent rect. 15 8
354 22.15 wind 9.0 90 > th dose independent rect. 13 10
360 22.15 temperature 15.0 30 > th dose dependent rect. 12 6
362 22.15 temperature 15.0 30 > th dose dependent rect. 12 14
390 22.16 temperature 25.0 720 < th dose dependent rect. 22 18
422 22.18 precipitation 0.1 43200 < th dose independent rect. 12 1
426 22.18 precipitation 0.1 43200 < th dose dependent rect. 12 1
427 22.18 wind 9.0 30 > th dose dependent rect. 13 5
453 22.19 temperature 20.0 30 > th dose dependent rect. 12 12
461 22.20 wind 9.0 30 > th dose dependent rect. 13 9
494 22.21 wind 9.0 90 > th dose dependent rect. 15 8
523 22.22 temperature 25.0 720 < th dose dependent sin 4 NA
526 22.22 wind 9.0 10 > th dose dependent rect. 15 3
536 22.22 temperature 25.0 720 < th dose dependent rect. 2 15
552 22.23 wind 9.0 10 > th dose independent rect. 15 3
556 22.23 humidity 80.0 30 < th dose independent rect. 12 6
559 22.23 temperature 25.0 720 < th dose dependent sin 7 NA
576 22.24 wind 9.0 90 > th dose independent rect. 15 3
581 22.24 wind 1.0 43200 < th dose independent rect. 16 16
592 22.24 temperature 20.0 30 > th dose dependent rect. 12 8
613 22.25 wind 9.0 90 > th dose independent rect. 13 5
618 22.25 wind 7.0 720 < th dose independent rect. 15 21
714 22.28 temperature 20.0 14400 < th dose dependent rect. 9 1
728 22.28 temperature 15.0 30 > th dose dependent rect. 12 19
732 22.29 temperature 20.0 14400 < th dose independent rect. 12 1
737 22.29 wind 3.0 30 > th dose dependent rect. 12 6
753 22.30 temperature 20.0 14400 < th dose independent rect. 11 5
797 22.31 temperature 20.0 14400 > th dose independent rect. 11 5
802 22.31 wind 7.0 720 < th dose independent rect. 8 19
804 22.31 radiation 10.0 14400 < th dose dependent rect. 9 2
836 22.32 wind 1.0 14400 < th dose independent rect. 19 6
868 22.33 temperature 20.0 14400 > th dose independent rect. 12 1
873 22.33 temperature 20.0 30 > th dose independent rect. 12 6
876 22.33 radiation 10.0 720 < th dose independent rect. 6 18
877 22.33 wind 7.0 720 < th dose independent rect. 13 23
878 22.33 radiation 1.0 4320 < th dose dependent rect. 18 1
891 22.33 radiation 1.0 4320 < th dose dependent rect. 18 8
906 22.34 temperature 25.0 270 < th dose independent sin 0 NA
920 22.34 wind 9.0 14400 > th dose dependent rect. 4 1
923 22.34 radiation 10.0 14400 < th dose dependent rect. 9 5
957 22.35 wind 5.0 90 > th dose independent rect. 12 18
960 22.35 wind 7.0 720 < th dose independent rect. 7 22
961 22.35 wind 9.0 43200 > th dose dependent rect. 15 1