Os03g0754200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose- phosphate isomerase).
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Os03g0754200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Triosephosphate isomerase, cytosolic (EC 5.3.1.1) (TIM) (Triose- phosphate isomerase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.71 | 0.411 | 7.12 | 0.131 | 0.809 | -0.737 | -0.68 | -0.807 | 0.383 | 9.79 | 76.24 | 4036 | -- | -- |
| 77.67 | 0.41 | 7.12 | 0.142 | 0.808 | -0.741 | -0.613 | -- | 0.377 | 9.8 | 76 | 4032 | -- | -- |
| 78.42 | 0.412 | 7.12 | 0.112 | 0.829 | -0.725 | -- | -0.698 | 0.386 | 9.78 | 76.36 | 4089 | -- | -- |
| 79.03 | 0.414 | 7.12 | 0.12 | 0.812 | -0.803 | -- | -- | 0.378 | 9.78 | 76.24 | 4036 | -- | -- |
| 103.07 | 0.473 | 7.1 | 0.164 | -- | -1.39 | -- | 0.988 | 0.54 | -- | 95 | 2294 | -- | -- |
| 88.7 | 0.442 | 7.11 | 0.102 | 0.869 | -- | -0.535 | -- | 0.41 | 9.96 | -- | -- | -- | -- |
| 89.81 | 0.444 | 7.11 | 0.0811 | 0.871 | -- | -- | -- | 0.409 | 9.96 | -- | -- | -- | -- |
| 104 | 0.475 | 7.12 | 0.0877 | -- | -1.3 | -- | -- | 0.484 | -- | 104.6 | 2282 | -- | -- |
| 79.38 | 0.415 | 7.12 | -- | 0.81 | -0.803 | -- | -- | 0.381 | 9.77 | 77 | 4026 | -- | -- |
| 135.41 | 0.544 | 7.13 | 0.0708 | -- | -- | -- | -- | 0.408 | -- | -- | -- | -- | -- |
| 89.99 | 0.444 | 7.11 | -- | 0.871 | -- | -- | -- | 0.4 | 9.95 | -- | -- | -- | -- |
| 92.23 | 0.447 | 7.13 | -- | -- | -1.32 | -- | -- | 0.415 | -- | 134.3 | 830 | -- | -- |
| 135.54 | 0.543 | 7.13 | -- | -- | -- | -- | -- | 0.4 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.61 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 2 | 69.70 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 33 | 70.85 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 34 | 70.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 35 | 70.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 39 | 70.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 45 | 71.11 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 49 | 71.13 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 57 | 71.22 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 65 | 71.36 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 67 | 71.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 70 | 71.51 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 78 | 71.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 80 | 71.69 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 88 | 71.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 89 | 71.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 91 | 71.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 10 | 7 |
| 92 | 71.84 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 95 | 71.86 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 104 | 72.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 106 | 72.03 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 116 | 72.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 120 | 72.17 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 11 | 2 |
| 122 | 72.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 123 | 72.19 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 124 | 72.19 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 125 | 72.19 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 135 | 72.28 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 137 | 72.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 10 | 7 |
| 166 | 72.55 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 184 | 72.67 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 190 | 72.69 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 16 |
| 205 | 72.76 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 226 | 72.88 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 242 | 72.98 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 245 | 72.99 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 246 | 72.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 247 | 72.99 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 249 | 73.00 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 250 | 73.00 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 252 | 73.00 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 326 | 73.18 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 17 |
| 355 | 73.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 356 | 73.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 16 |
| 359 | 73.31 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 360 | 73.31 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 396 | 73.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 404 | 73.45 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 418 | 73.51 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 429 | 73.54 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 462 | 73.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 5 |
| 532 | 73.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 556 | 73.93 | wind | 1.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 561 | 73.95 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 567 | 73.96 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 601 | 74.07 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 19 |
| 602 | 74.07 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 618 | 74.12 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 628 | 74.15 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 642 | 74.20 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 643 | 74.20 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 646 | 74.20 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 648 | 74.20 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 656 | 74.23 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 686 | 74.33 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 699 | 74.36 | wind | 3.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 765 | 74.52 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 854 | 74.68 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 873 | 74.69 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 20 |
| 907 | 74.75 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 936 | 74.82 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 974 | 74.89 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 975 | 74.89 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |