Os03g0752000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0752000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.35 | 0.725 | 3.1 | -0.517 | 0.146 | 0.509 | -0.699 | -3.24 | -0.0994 | 8.91 | 68 | 3990 | -- | -- |
| 246.86 | 0.732 | 3.12 | -0.381 | 0.0573 | 0.528 | -0.569 | -- | -0.0837 | 8.75 | 55.21 | 10246 | -- | -- |
| 239.93 | 0.721 | 3.1 | -0.533 | 0.137 | 0.489 | -- | -3.04 | -0.0925 | 9.22 | 68.05 | 4006 | -- | -- |
| 246.67 | 0.731 | 3.09 | -0.315 | 0.118 | 0.59 | -- | -- | -0.0351 | 8.75 | 56 | 10720 | -- | -- |
| 240.77 | 0.723 | 3.11 | -0.524 | -- | 0.469 | -- | -2.97 | -0.0967 | -- | 68.24 | 4156 | -- | -- |
| 253.02 | 0.746 | 3.1 | -0.397 | 0.106 | -- | -0.466 | -- | -0.0693 | 7.96 | -- | -- | -- | -- |
| 253.61 | 0.746 | 3.1 | -0.408 | 0.108 | -- | -- | -- | -0.0682 | 8.96 | -- | -- | -- | -- |
| 247.51 | 0.733 | 3.09 | -0.306 | -- | 0.585 | -- | -- | -0.0323 | -- | 56 | 10717 | -- | -- |
| 248.85 | 0.735 | 3.09 | -- | 0.111 | 0.651 | -- | -- | -0.0125 | 9.39 | 58.8 | 10357 | -- | -- |
| 254.28 | 0.745 | 3.1 | -0.408 | -- | -- | -- | -- | -0.0675 | -- | -- | -- | -- | -- |
| 258.01 | 0.751 | 3.09 | -- | 0.108 | -- | -- | -- | -0.0227 | 9.24 | -- | -- | -- | -- |
| 249.55 | 0.736 | 3.08 | -- | -- | 0.65 | -- | -- | -0.00486 | -- | 58.83 | 10350 | -- | -- |
| 258.68 | 0.751 | 3.09 | -- | -- | -- | -- | -- | -0.0222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 237.57 | humidity | 60 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 2 | 237.88 | humidity | 90 | 4320 | < th | dose dependent | rect. | 20 | 14 |
| 14 | 238.27 | humidity | 90 | 4320 | < th | dose dependent | sin | 10 | NA |
| 20 | 238.48 | humidity | 70 | 4320 | < th | dose independent | rect. | 15 | 17 |
| 31 | 238.70 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 37 | 238.78 | humidity | 70 | 4320 | < th | dose independent | sin | 14 | NA |
| 44 | 238.84 | humidity | 70 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 45 | 238.86 | humidity | 70 | 4320 | < th | dose dependent | rect. | 15 | 17 |
| 46 | 238.88 | humidity | 60 | 4320 | > th | dose dependent | rect. | 22 | 13 |
| 50 | 238.91 | humidity | 70 | 4320 | > th | dose independent | sin | 13 | NA |
| 51 | 238.92 | humidity | 70 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 68 | 238.97 | wind | 9 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 75 | 239.00 | humidity | 70 | 4320 | < th | dose dependent | rect. | 15 | 6 |
| 89 | 239.03 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 101 | 239.08 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 120 | 239.10 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 124 | 239.11 | humidity | 70 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 140 | 239.15 | humidity | 70 | 4320 | < th | dose independent | rect. | 11 | 21 |
| 195 | 239.28 | humidity | 80 | 4320 | > th | dose independent | rect. | 18 | 17 |
| 229 | 239.38 | humidity | 50 | 4320 | > th | dose dependent | sin | 8 | NA |
| 239 | 239.40 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 273 | 239.51 | humidity | 70 | 4320 | < th | dose independent | rect. | 11 | 10 |
| 310 | 239.56 | humidity | 50 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 321 | 239.58 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 1 | 18 |
| 344 | 239.63 | wind | 9 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 353 | 239.65 | humidity | 90 | 90 | < th | dose independent | rect. | 1 | 2 |
| 359 | 239.65 | radiation | 30 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 372 | 239.66 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 21 |
| 411 | 239.74 | humidity | 80 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 477 | 239.85 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 480 | 239.86 | humidity | 60 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 495 | 239.88 | humidity | 80 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 496 | 239.88 | wind | 5 | 90 | < th | dose independent | rect. | 3 | 22 |
| 517 | 239.90 | humidity | 90 | 4320 | < th | dose dependent | rect. | 22 | 3 |
| 541 | 239.97 | humidity | 60 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 565 | 240.02 | humidity | 70 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 589 | 240.04 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 14 |
| 596 | 240.05 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 12 |
| 733 | 240.25 | humidity | 70 | 4320 | < th | dose independent | no | NA | NA |
| 739 | 240.25 | humidity | 70 | 4320 | < th | dose independent | rect. | 6 | 15 |
| 827 | 240.29 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 23 |
| 829 | 240.30 | humidity | 80 | 4320 | > th | dose independent | sin | 9 | NA |
| 898 | 240.36 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 22 |
| 918 | 240.38 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 1 | 1 |