Os03g0751600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os03g0751600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 263.14 | 0.762 | 9.98 | -0.888 | 2.92 | -1.77 | 1.59 | 3.68 | -1 | 5.43 | 23.43 | 1242 | -- | -- |
| 285.74 | 0.787 | 9.95 | -0.545 | 2.93 | -1.6 | 1.79 | -- | -0.886 | 5.42 | 30 | 1229 | -- | -- |
| 268.98 | 0.764 | 9.98 | -0.848 | 2.97 | -1.81 | -- | 3.91 | -0.986 | 5.45 | 20.25 | 1231 | -- | -- |
| 293.78 | 0.798 | 9.95 | -0.48 | 2.89 | -1.53 | -- | -- | -0.877 | 5.32 | 29.4 | 1242 | -- | -- |
| 680.6 | 1.22 | 10 | -0.866 | -- | -1.66 | -- | 3.52 | -0.979 | -- | 28.42 | 1343 | -- | -- |
| 347.19 | 0.874 | 9.88 | -0.283 | 2.82 | -- | 1.3 | -- | -0.522 | 4.69 | -- | -- | -- | -- |
| 351.45 | 0.878 | 9.88 | -0.291 | 2.83 | -- | -- | -- | -0.529 | 4.62 | -- | -- | -- | -- |
| 694.02 | 1.23 | 10 | -0.423 | -- | -1.51 | -- | -- | -0.85 | -- | 29.98 | 1358 | -- | -- |
| 299.74 | 0.806 | 9.95 | -- | 2.81 | -1.41 | -- | -- | -0.811 | 5.21 | 20 | 1293 | -- | -- |
| 776.72 | 1.3 | 9.9 | -0.183 | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
| 353.68 | 0.88 | 9.87 | -- | 2.82 | -- | -- | -- | -0.497 | 4.63 | -- | -- | -- | -- |
| 698.51 | 1.23 | 9.98 | -- | -- | -1.46 | -- | -- | -0.786 | -- | 30 | 1353 | -- | -- |
| 777.6 | 1.3 | 9.9 | -- | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 272.53 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 2 | 273.91 | humidity | 90 | 720 | < th | dose dependent | sin | 13 | NA |
| 3 | 273.94 | humidity | 90 | 720 | < th | dose dependent | rect. | 16 | 15 |
| 30 | 277.60 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 32 | 277.83 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 39 | 278.47 | humidity | 50 | 720 | > th | dose dependent | sin | 12 | NA |
| 66 | 279.69 | humidity | 60 | 720 | > th | dose dependent | rect. | 15 | 9 |
| 73 | 279.93 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 141 | 283.05 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 147 | 283.25 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 154 | 283.38 | humidity | 50 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 186 | 284.01 | humidity | 80 | 720 | < th | dose independent | rect. | 16 | 5 |
| 211 | 284.32 | radiation | 20 | 1440 | < th | dose dependent | sin | 23 | NA |
| 219 | 284.39 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 226 | 284.43 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 267 | 284.92 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 268 | 284.95 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 269 | 284.98 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 286 | 285.29 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 325 | 285.70 | humidity | 80 | 720 | > th | dose independent | rect. | 14 | 19 |
| 327 | 285.73 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 348 | 285.81 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 371 | 285.94 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 372 | 285.94 | radiation | 20 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 374 | 285.95 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 393 | 286.04 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 22 |
| 402 | 286.08 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 410 | 286.11 | radiation | 20 | 1440 | < th | dose independent | sin | 0 | NA |
| 415 | 286.12 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 416 | 286.12 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 20 |
| 425 | 286.14 | humidity | 80 | 720 | > th | dose independent | rect. | 15 | 9 |
| 427 | 286.14 | radiation | 20 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 495 | 286.41 | radiation | 20 | 1440 | < th | dose independent | rect. | 23 | 18 |
| 498 | 286.42 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 15 |
| 667 | 286.77 | radiation | 20 | 1440 | < th | dose independent | no | NA | NA |
| 674 | 286.77 | radiation | 20 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 752 | 286.91 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 754 | 286.92 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 801 | 287.07 | humidity | 80 | 720 | > th | dose independent | rect. | 11 | 13 |
| 873 | 287.48 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 912 | 287.71 | humidity | 60 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 938 | 287.76 | radiation | 10 | 1440 | > th | dose independent | sin | 3 | NA |
| 960 | 287.85 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 23 |