Os03g0750700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Strictosidine synthase family protein.
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Os03g0750700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Strictosidine synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.15 | 0.515 | 11.2 | -2.36 | 0.702 | -0.925 | -1.42 | -0.0324 | -0.317 | 11.9 | 73.1 | 1337 | -- | -- |
| 119.92 | 0.51 | 11.2 | -2.37 | 0.746 | -0.942 | -1.42 | -- | -0.319 | 11.9 | 73.19 | 1299 | -- | -- |
| 128.36 | 0.528 | 11.2 | -2.4 | 0.767 | -0.945 | -- | -0.334 | -0.326 | 11.8 | 73 | 1286 | -- | -- |
| 128.64 | 0.528 | 11.2 | -2.43 | 0.757 | -0.966 | -- | -- | -0.327 | 11.7 | 73.21 | 1299 | -- | -- |
| 150.59 | 0.572 | 11.3 | -2.5 | -- | -1.04 | -- | 0.49 | -0.341 | -- | 73.36 | 1540 | -- | -- |
| 150.5 | 0.575 | 11.2 | -2.19 | 0.614 | -- | -1.56 | -- | -0.188 | 11.7 | -- | -- | -- | -- |
| 160.82 | 0.594 | 11.2 | -2.26 | 0.625 | -- | -- | -- | -0.196 | 11.3 | -- | -- | -- | -- |
| 151.1 | 0.573 | 11.3 | -2.44 | -- | -1.02 | -- | -- | -0.325 | -- | 73.5 | 1526 | -- | -- |
| 265.87 | 0.759 | 11.2 | -- | 0.706 | -0.835 | -- | -- | -0.132 | 11.5 | 87 | 1451 | -- | -- |
| 185.24 | 0.636 | 11.2 | -2.27 | -- | -- | -- | -- | -0.202 | -- | -- | -- | -- | -- |
| 295.13 | 0.804 | 11.2 | -- | 0.648 | -- | -- | -- | 0.0555 | 11.5 | -- | -- | -- | -- |
| 257.82 | 0.748 | 11.2 | -- | -- | -1.6 | -- | -- | -0.248 | -- | 71.23 | 29141 | -- | -- |
| 321.51 | 0.837 | 11.2 | -- | -- | -- | -- | -- | 0.0505 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.03 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 8 | 119.29 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 10 |
| 17 | 119.56 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 23 | 119.77 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 99 | 122.04 | humidity | 60 | 1440 | > th | dose dependent | rect. | 2 | 13 |
| 100 | 122.08 | humidity | 60 | 1440 | > th | dose dependent | sin | 3 | NA |
| 117 | 122.33 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 196 | 123.06 | humidity | 70 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 221 | 123.24 | humidity | 60 | 1440 | > th | dose dependent | rect. | 18 | 21 |
| 290 | 123.56 | humidity | 90 | 1440 | < th | dose dependent | sin | 5 | NA |
| 352 | 123.78 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 360 | 123.81 | humidity | 60 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 389 | 123.89 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 400 | 123.92 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 12 |
| 416 | 123.96 | humidity | 70 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 478 | 124.02 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 520 | 124.09 | humidity | 70 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 574 | 124.25 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 588 | 124.29 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 20 |
| 590 | 124.30 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 597 | 124.32 | humidity | 70 | 1440 | > th | dose independent | sin | 9 | NA |
| 601 | 124.33 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 616 | 124.37 | humidity | 90 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 671 | 124.55 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 703 | 124.60 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 19 |
| 753 | 124.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 800 | 124.78 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 906 | 125.03 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 926 | 125.09 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 957 | 125.18 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 992 | 125.29 | humidity | 70 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 996 | 125.30 | humidity | 80 | 1440 | < th | dose dependent | sin | 9 | NA |