Os03g0750500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0750500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 133.29 | 0.542 | 11.7 | 1.01 | 0.864 | -1.71 | 0.64 | -0.576 | -0.0778 | 9.11 | 21.5 | 1412 | -- | -- |
| 133.33 | 0.538 | 11.7 | 1.13 | 0.862 | -1.61 | 0.671 | -- | -0.0314 | 9.05 | 21.7 | 1399 | -- | -- |
| 134.65 | 0.54 | 11.7 | 1.04 | 0.859 | -1.68 | -- | -0.496 | -0.0697 | 9.17 | 21.5 | 1408 | -- | -- |
| 134.63 | 0.54 | 11.7 | 1.08 | 0.849 | -1.54 | -- | -- | -0.0303 | 9.1 | 21.9 | 1395 | -- | -- |
| 157.68 | 0.585 | 11.7 | 1.01 | -- | -1.52 | -- | 0.0155 | -0.00782 | -- | 22.1 | 826 | -- | -- |
| 214.68 | 0.687 | 11.8 | 0.473 | 0.881 | -- | 0.559 | -- | -0.52 | 9.37 | -- | -- | -- | -- |
| 215.79 | 0.688 | 11.8 | 0.494 | 0.878 | -- | -- | -- | -0.519 | 9.45 | -- | -- | -- | -- |
| 157.67 | 0.585 | 11.7 | 0.999 | -- | -1.52 | -- | -- | -0.0157 | -- | 22.15 | 830 | -- | -- |
| 157.59 | 0.585 | 11.7 | -- | 0.706 | -1.17 | -- | -- | -0.212 | 8.84 | 22.4 | 966 | -- | -- |
| 261.01 | 0.755 | 11.8 | 0.489 | -- | -- | -- | -- | -0.516 | -- | -- | -- | -- | -- |
| 222.23 | 0.697 | 11.8 | -- | 0.877 | -- | -- | -- | -0.574 | 9.4 | -- | -- | -- | -- |
| 181.3 | 0.627 | 11.7 | -- | -- | -1.3 | -- | -- | -0.171 | -- | 22.4 | 801 | -- | -- |
| 267.31 | 0.763 | 11.8 | -- | -- | -- | -- | -- | -0.57 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 137.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 18 | 138.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 28 | 139.04 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 33 | 139.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 35 | 139.17 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 56 | 139.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 60 | 139.56 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 67 | 139.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 146 | 140.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 147 | 140.40 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 173 | 140.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 186 | 140.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 276 | 141.59 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 350 | 142.20 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 370 | 142.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 397 | 142.56 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 463 | 143.04 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 570 | 143.88 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 610 | 144.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 650 | 144.34 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 659 | 144.40 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 660 | 144.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 695 | 144.66 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 731 | 144.92 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 879 | 145.90 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 903 | 146.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 969 | 146.42 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |