Os03g0750400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0750400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.6 | 0.392 | 3.01 | 0.122 | 0.138 | -0.175 | 0.0424 | 0.0724 | 0.317 | 7.67 | 1006 | 46 | -- | -- |
| 69.63 | 0.389 | 3.01 | 0.12 | 0.139 | -0.173 | 0.0446 | -- | 0.315 | 7.65 | 1006 | 46 | -- | -- |
| 69.6 | 0.389 | 3.01 | 0.123 | 0.138 | -0.175 | -- | 0.0728 | 0.318 | 7.56 | 1006 | 46 | -- | -- |
| 69.63 | 0.389 | 3.01 | 0.121 | 0.14 | -0.173 | -- | -- | 0.315 | 7.54 | 1006 | 46 | -- | -- |
| 70.6 | 0.391 | 3.02 | 0.126 | -- | -0.158 | -- | 0.0895 | 0.313 | -- | 1006 | 44 | -- | -- |
| 72.1 | 0.398 | 3.03 | 0.125 | 0.105 | -- | 0.054 | -- | 0.241 | 8.6 | -- | -- | -- | -- |
| 72.11 | 0.398 | 3.03 | 0.126 | 0.106 | -- | -- | -- | 0.241 | 8.34 | -- | -- | -- | -- |
| 70.65 | 0.391 | 3.02 | 0.125 | -- | -0.156 | -- | -- | 0.309 | -- | 1006 | 37 | -- | -- |
| 70.02 | 0.39 | 3.01 | -- | 0.141 | -0.176 | -- | -- | 0.303 | 7.48 | 1006 | 46 | -- | -- |
| 72.73 | 0.399 | 3.03 | 0.127 | -- | -- | -- | -- | 0.242 | -- | -- | -- | -- | -- |
| 72.53 | 0.398 | 3.03 | -- | 0.107 | -- | -- | -- | 0.227 | 8.25 | -- | -- | -- | -- |
| 71.06 | 0.393 | 3.02 | -- | -- | -0.157 | -- | -- | 0.296 | -- | 1006 | 46 | -- | -- |
| 73.16 | 0.399 | 3.03 | -- | -- | -- | -- | -- | 0.228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.30 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 29 | 66.13 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 34 | 66.39 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 63 | 66.49 | wind | 1.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 67 | 66.65 | wind | 1.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 79 | 67.05 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 82 | 67.28 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 83 | 67.33 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 84 | 67.34 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 87 | 67.36 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 89 | 67.37 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 1 | 8 |
| 90 | 67.38 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 104 | 67.55 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 110 | 67.66 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 128 | 67.72 | temperature | 25.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 129 | 67.73 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 130 | 67.74 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 148 | 67.83 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 8 |
| 159 | 67.91 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 180 | 68.12 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 220 | 68.42 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 225 | 68.44 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 9 | 17 |
| 244 | 68.49 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 245 | 68.50 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 246 | 68.50 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 21 |
| 248 | 68.52 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 253 | 68.56 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 254 | 68.56 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 255 | 68.57 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 258 | 68.57 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 276 | 68.66 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 282 | 68.68 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 290 | 68.71 | radiation | 10.0 | 90 | < th | dose independent | rect. | 14 | 3 |
| 321 | 68.78 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 9 |
| 355 | 68.84 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 357 | 68.85 | atmosphere | 1005.0 | 30 | > th | dose independent | sin | 19 | NA |
| 372 | 68.90 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 14 | 12 |
| 381 | 68.92 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 2 | 9 |
| 391 | 68.93 | wind | 1.0 | 720 | < th | dose dependent | rect. | 6 | 13 |
| 404 | 68.96 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 417 | 68.99 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 424 | 69.00 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 3 |
| 438 | 69.02 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 463 | 69.08 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 494 | 69.12 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 499 | 69.12 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 13 | 10 |
| 506 | 69.13 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 507 | 69.13 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 530 | 69.18 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 551 | 69.19 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 23 |
| 561 | 69.21 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 595 | 69.24 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 609 | 69.25 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 615 | 69.25 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 11 |
| 617 | 69.26 | temperature | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 667 | 69.28 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 13 | 13 |
| 670 | 69.28 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 5 | 18 |
| 696 | 69.29 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 697 | 69.29 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 707 | 69.30 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 708 | 69.31 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 712 | 69.31 | wind | 1.0 | 1440 | > th | dose independent | rect. | 2 | 10 |
| 726 | 69.32 | atmosphere | 1005.0 | 30 | > th | dose dependent | sin | 18 | NA |
| 741 | 69.33 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 742 | 69.33 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 747 | 69.33 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 9 | 14 |
| 749 | 69.34 | temperature | 25.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 758 | 69.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 760 | 69.34 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 767 | 69.35 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 768 | 69.35 | temperature | 10.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 771 | 69.35 | humidity | 50.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 774 | 69.35 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 775 | 69.35 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 777 | 69.35 | radiation | 1.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 782 | 69.35 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 1 |
| 793 | 69.35 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 23 |
| 797 | 69.35 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 805 | 69.35 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 808 | 69.36 | wind | 3.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 830 | 69.36 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 9 | 11 |
| 837 | 69.36 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 844 | 69.36 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 3 |
| 845 | 69.36 | atmosphere | 1005.0 | 720 | > th | dose dependent | rect. | 9 | 6 |
| 873 | 69.38 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 2 |
| 907 | 69.40 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 920 | 69.42 | temperature | 25.0 | 1440 | < th | dose independent | sin | 11 | NA |
| 921 | 69.42 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 923 | 69.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 926 | 69.42 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 930 | 69.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 939 | 69.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 940 | 69.42 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 941 | 69.42 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 952 | 69.42 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 14 |
| 954 | 69.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 959 | 69.42 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 10 | 12 |
| 963 | 69.43 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 974 | 69.44 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 975 | 69.44 | wind | 3.0 | 1440 | > th | dose independent | rect. | 2 | 2 |