Os03g0749400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0749400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.97 | 0.428 | 14.6 | -0.774 | 2.94 | -1.77 | 0.82 | -1.48 | -0.679 | 19.7 | 24.17 | 4286 | -- | -- |
| 82.35 | 0.423 | 14.7 | -0.811 | 2.93 | -1.41 | 0.861 | -- | -0.625 | 19.6 | 45.41 | 2782 | -- | -- |
| 84.87 | 0.429 | 14.6 | -0.802 | 2.94 | -1.79 | -- | -1.51 | -0.684 | 19.7 | 24.02 | 4281 | -- | -- |
| 84.44 | 0.428 | 14.7 | -0.832 | 2.93 | -1.41 | -- | -- | -0.624 | 19.6 | 63.13 | 2781 | -- | -- |
| 345.37 | 0.866 | 14.6 | -0.999 | -- | -3.91 | -- | -1.2 | -0.907 | -- | 57.1 | 563 | -- | -- |
| 122.45 | 0.519 | 14.6 | -0.238 | 2.92 | -- | 0.858 | -- | -0.336 | 19.8 | -- | -- | -- | -- |
| 124.58 | 0.523 | 14.6 | -0.261 | 2.92 | -- | -- | -- | -0.335 | 19.8 | -- | -- | -- | -- |
| 346.19 | 0.867 | 14.7 | -1.2 | -- | -3.94 | -- | -- | -0.952 | -- | 99.88 | 563 | -- | -- |
| 97.88 | 0.461 | 14.6 | -- | 2.84 | -1.21 | -- | -- | -0.488 | 19.8 | 95.97 | 1859 | -- | -- |
| 585.65 | 1.13 | 14.5 | -0.296 | -- | -- | -- | -- | -0.376 | -- | -- | -- | -- | -- |
| 126.36 | 0.526 | 14.6 | -- | 2.92 | -- | -- | -- | -0.306 | 19.8 | -- | -- | -- | -- |
| 381.05 | 0.909 | 14.6 | -- | -- | -3.51 | -- | -- | -0.766 | -- | 386.3 | 552 | -- | -- |
| 587.96 | 1.13 | 14.5 | -- | -- | -- | -- | -- | -0.343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.04 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 2 | 81.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 3 | 81.32 | temperature | 15 | 4320 | > th | dose dependent | rect. | 19 | 11 |
| 6 | 81.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 9 | 81.38 | temperature | 15 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 10 | 81.39 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 14 | 81.42 | temperature | 15 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 17 | 81.43 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 7 |
| 19 | 81.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 10 |
| 43 | 81.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 93 | 81.64 | temperature | 15 | 4320 | > th | dose dependent | rect. | 2 | 4 |
| 126 | 81.73 | temperature | 25 | 4320 | < th | dose dependent | sin | 12 | NA |
| 155 | 81.77 | temperature | 15 | 4320 | > th | dose dependent | sin | 12 | NA |
| 165 | 81.79 | radiation | 1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 219 | 81.88 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 220 | 81.88 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 227 | 81.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 238 | 81.90 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 249 | 81.92 | temperature | 15 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 270 | 81.96 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 356 | 82.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 407 | 82.15 | temperature | 25 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 426 | 82.18 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 441 | 82.21 | temperature | 20 | 4320 | > th | dose independent | rect. | 14 | 14 |
| 595 | 82.48 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 825 | 82.83 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |